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Protein Overview: PLDA1_ARATH

General Information:
Name(s) found: PLDA1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Phospholipase D alpha 1 OS=Arabidopsis thaliana GN=PLDALPHA1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 810 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    chloroplast [IDA]
    membrane [IDA]
    mitochondrion [IDA]
    clathrin-coated vesicle [IDA]
    plasma membrane [IDA]
    Biological Process: regulation of stomatal movement [IMP]
    response to cadmium ion [IEP]
    seed germination [IMP]
    fatty acid metabolic process [IMP][TAS]
    positive regulation of abscisic acid mediated signaling pathway [IMP]
    Molecular Function: phospholipase D activity [IDA][IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR  60
   61 VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP IGATLIGRAY IPVDQVINGE 120
  121 EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC 180
  181 KVSLYQDAHI PDNFVPRIPL AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV 240
  241 RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR 300
  301 GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI 360
  361 DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG PREPWHDIHS RLEGPIAWDV 420
  421 MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE 480
  481 SPEAAAEAGL VSGKDNIIDR SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED 540
  541 INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK 600
  601 DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV 660
  661 HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH HLSHRQPARG QIHGFRMSLW 720
  721 YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI 780
  781 TELPGFEFFP DTKARILGTK SDYLPPILTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..250] PSI-BLAST 19.0 Synaptogamin I
    2 View Details [251..388] PSI-BLAST 5.39794 Crystal Structure of the Catalytic Domain of Atypical Protein Kinase C-iota
    3 View Details [389..464] deduced N/A No confident structure predictions are available.
    4 View Details [465..621] PSI-BLAST 6.09691 Nuclease Nuc
    5 View Details [622..810] MSA 1.338976 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle