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Protein Overview: PSD3B_ARATH

General Information:
Name(s) found: PSD3B_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • 26S proteasome non-ATPase regulatory subunit 3 homolog B OS=Arabidopsis thaliana GN=RPN3B PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 487 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    proteasome regulatory particle, lid subcomplex [ISS]
    plasma membrane [IDA]
    Biological Process: protein catabolic process [TAS]
    ubiquitin-dependent protein catabolic process [TAS]
    Molecular Function: enzyme regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQDVEMKDN QTPTQSVVSA PTSTLQNLKE IAALIDTGSY TKEVRRIARA VRLTVGLRRK  60
   61 LTGSVISSFL DFALVPGSEA HTRLSSFVPK SDEHDMEVDT ASSNSQAPPK HLPAELEIYC 120
  121 YFIVLLFLID QKKYNEAKVC STASIARLKS VNRRTVDVIA SKLYFYYSLS YELTNDLAEI 180
  181 RSTLLALHHS ATLRHDELGQ ETLLNLLLRN YLHYNLYDQA EKLRSKAPRF EAHSNQQFCR 240
  241 YLFYLGKIRT IQLEYTDAKE SLLQAARKAP VASLGFRIQC NKWAIIVRLL LGEIPERSIF 300
  301 TQKGMEKTLR PYFELTNAVR IGDLELFGKI QEKFAKTFAE DRTHNLIVRL RHNVIRTGLR 360
  361 NISISYSRIS LQDVAQKLRL NSANPVADAE SIVAKAIRDG AIDATIDHKN GCMVSKETGD 420
  421 IYSTNEPQTA FNSRIAFCLN MHNEAVRALR FPPNTHREKE SEEKRREMKQ QEEELAKYMA 480
  481 EEDDDDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] MSA 1.141994 View MSA. Confident ab initio structure predictions are available.
    2 View Details [77..294] PSI-BLAST 5.045757 Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form)
    3 View Details [295..487] PSI-BLAST 8.69897 Solution structure of the PCI domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle