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Protein Overview: PCNA2_ARATH

General Information:
Name(s) found: PCNA2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6225833|sp|Q9ZW35.1|PCNA2_ARATH RecName: Full=Proliferating cell nuclear antigen 2; Short=PCNA 2 [NCBI NR]
  • gi|3980379|gb|AAC95182.1| putative proliferating cell nuclear antigen, PCNA [Arabidopsis thaliana] [NCBI NR]
  • gi|25294330|pir||H84697 hypothetical protein At2g29570 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|155675857|gb|ABU25234.1| proliferating cell nuclear antigen 2 [Arabidopsis thaliana] [NCBI NR]
  • gi|15227564|ref|NP_180517.1| PCNA2 (PROLIFERATING CELL NUCLEAR ANTIGEN 2); DNA binding / DNA polymerase processivity factor [Arabidopsis thaliana] [NCBI NR]
  • gi|117958995|gb|ABK59695.1| At2g29570 [Arabidopsis thaliana] [NCBI NR]
  • Proliferating cell nuclear antigen 2 OS=Arabidopsis thaliana GN=PCNA2 PE=1 SV=1 [Swiss-Prot]
  • (Q9ZW35) Proliferating cell nuclear antigen 2 (PCNA 2) [Swiss-Prot]
  • putative proliferating cell nuclear antigen, PCNA [Arabidopsis thaliana]gi|15227564|ref|NP_180517.1| proliferating cell nuclear antigen 2 (PCNA2) [Arabidopsis thaliana]gi|25294330|pir||H84697 hypothetical protein At2g29570 [imported] - Arabidopsis thali [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Proliferating cell nuclear antigen 2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PCNA2 | PCNA2 (PROLIFERATING CELL NUCLEAR ANTIGEN 2); DNA binding / DNA polymerase processivity factor | chr2:12657216-12658675 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative proliferating cell nuclear antigen, PCNA [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Proliferating cell nuclear antigen 2 (PCNA 2) [nr-271106-contam.fasta]
  • At2g29570 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • PCNA2 (PROLIFERATING CELL NUCLEAR 2); DNA binding / DNA polymerase processivity factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PCNA2, ATPCNA2 | proliferating cell nuclear antigen 2 | chr2:12650139-12651598 REVERSE LENGTH=264 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Proliferating cell nuclear antigen 2 OS=Arabidopsis thaliana GN=At2g29570 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 264 amino acids

    Gene Ontology:
    Cellular Component: PCNA complex [IEA]
    nucleus [ISS]
    Biological Process: error-prone translesion synthesis [IDA]
    regulation of DNA replication [ISS]
    Molecular Function: DNA binding [IEA][ISS]
    DNA polymerase processivity factor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELRLVQGS LLKKVLEAVK DLVNDANFDC STTGFSLQAM DSSHVALVSL LLRSEGFEHY  60
   61 RCDRNLSMGM NLGNMSKMLK CAGNDDIITI KADDGSDTVT FMFESPTQDK IADFEMKLMD 120
  121 IDSEHLGIPD AEYHSIVRMP SGEFSRICKD LSSIGDTVVI SVTKEGVKFS TAGDIGTANI 180
  181 VLRQNTTVDK PEDAIVIEMN EPVSLSFALR YMNSFTKATP LSETVTISLS SELPVVVEYK 240
  241 VAEMGYIRYY LAPKIEEEED TKPE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..264] PSI-BLAST 92.39794 Prolifirating cell nuclear antigen (PCNA)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA polymerase processivity factor activity
    		•  9.9878881203193 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
    		•  5.01426276108174 bayes_pls_golite062009
  • DNA polymerase activity
    		•  4.9656505576274 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  3.23598180825386 bayes_pls_golite062009
  • mismatched DNA binding
    		•  2.75713709757781 bayes_pls_golite062009
  • DNA insertion or deletion binding
    		•  2.48680473192192 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.32553487472442 bayes_pls_golite062009
  • DNA binding
    		•  2.24518789437215 bayes_pls_golite062009
  • binding
    		•  1.88302251910664 bayes_pls_golite062009
  • dinucleotide insertion or deletion binding
    		•  1.68153838099672 bayes_pls_golite062009
  • mismatch repair complex binding
    		•  1.6296761041903 bayes_pls_golite062009
  • MutLalpha complex binding
    		•  1.21442872292245 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.14392061238362 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.785542777582287 bayes_pls_golite062009
  • catalytic activity
    		•  0.48077242755678 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  0.457118392479642 bayes_pls_golite062009
  • protein binding
    		•  0.452894757163315 bayes_pls_golite062009
  • purine-specific mismatch base pair DNA N-glycosylase activity
    		•  0.408841404605319 bayes_pls_golite062009
  • mismatch base pair DNA N-glycosylase activity
    		•  0.387975438046246 bayes_pls_golite062009
  • transferase activity
    		•  0.345371754708312 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle