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Protein Overview: OTC_ARATH

General Information:
Name(s) found: OTC_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Ornithine carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana GN=OTC PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: cellular amino acid metabolic process [IEA][ISS]
    Molecular Function: amino acid binding [IEA][ISS]
    ornithine carbamoyltransferase activity [IEA]
    carboxyl- or carbamoyltransferase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAMASHVS TARSPALSFS SSSSSFFPGT TLRRFSAVSL PSPALPRLRV SCQASSVTSP  60
   61 SSPSDVKGKS DLKDFLAIDD FDTATIKTIL DKASEVKALL KSGERNYLPF KGKSMSMIFA 120
  121 KPSMRTRVSF ETGFFLLGGH ALYLGPNDIQ MGKREETRDV ARVLSRYNDI IMARVFAHQD 180
  181 ILDLANYSSV PVVNGLTDHN HPCQIMADAL TMIEHIGQVE GTKVVYVGDG NNMVHSWLEL 240
  241 ASVIPFHFVC ACPKGYEPDK ERVSKAKQAG LSKIEITNDP KEAVIGADVV YSDVWASMGQ 300
  301 KDEAEARRKA FQGFQVDEAL MKLAGQKAYF MHCLPAERGV EVTNGVVEAP YSIVFPQAEN 360
  361 RMHAQNAIML HLLGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..375] PSI-BLAST 126.0 Refined Structure of Pyrococcus furiosus Ornithine Carbamoyltransferase at 1.87 A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ornithine carbamoyltransferase activity
    		•  6.08861672645671 bayes_pls_golite062009
  • carboxyl- or carbamoyltransferase activity
    		•  5.32518877756022 bayes_pls_golite062009
  • aspartate carbamoyltransferase activity
    		•  3.84118892938517 bayes_pls_golite062009
  • transferase activity
    		•  2.2887439598954 bayes_pls_golite062009
  • carbamoyl-phosphate synthase activity
    		•  2.21516900257798 bayes_pls_golite062009
  • carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
    		•  2.19154218663721 bayes_pls_golite062009
  • catalytic activity
    		•  2.06069688716378 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.54712264845123 bayes_pls_golite062009
  • binding
    		•  1.00470116390248 bayes_pls_golite062009
  • dihydroorotase activity
    		•  0.585784960037124 bayes_pls_golite062009
  • protein binding
    		•  0.171217252293449 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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