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Protein Overview: NIP42_ARATH

General Information:
Name(s) found: NIP42_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA][ISS]
    integral to membrane [IEA]
    Biological Process: transport [IEA][ISS]
    Molecular Function: water channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSHGEEIED EQISRIEKGN CKDSQGGMET AICSSPSIVC LTQKLIAEMI GTYFIIFSGC  60
   61 GVVVVNVLYG GTITFPGICV TWGLIVMVMI YSTGHISGAH FNPAVTVTFA VFRRFPWYQV 120
  121 PLYIGAQLTG SLLASLTLRL MFNVTPKAFF GTTPTDSSGQ ALVAEIIISF LLMFVISGVA 180
  181 TDSRATGELA GIAVGMTIIL NVFVAGPISG ASMNPARSLG PAIVMGRYKG IWVYIVGPFV 240
  241 GIFAGGFVYN FMRFTDKPLR ELTKSASFLR SVAQKDNASK SDG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 57.522879 Crystal structure of the spinach aquaporin SoPIP2;1 in an open conformation to 3.9 resolution


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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