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Protein Overview: LTI78_ARATH

General Information:
Name(s) found: LTI78_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Low-temperature-induced 78 kDa protein OS=Arabidopsis thaliana GN=LTI78 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 710 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: response to cold [IEP]
    hyperosmotic salinity response [IEP]
    response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    response to osmotic stress [IGI]
    response to desiccation [IMP]
    response to water deprivation [IEP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQTEEPPLN THQQHPEEVE HHENGATKMF RKVKARAKKF KNSLTKHGQS NEHEQDHDLV  60
   61 EEDDDDDELE PEVIDAPGVT GKPRETNVPA SEEIIPPGTK VFPVVSSDYT KPTESVPVQE 120
  121 ASYGHDAPAH SVRTTFTSDK EEKRDVPIHH PLSELSDREE SRETHHESLN TPVSLLSGTE 180
  181 DVTSTFAPSG DDEYLDGQRK VNVETPITLE EESAVSDYLS GVSNYQSKVT DPTKEETGGV 240
  241 PEIAESFGNM EVTDESPDQK PGQFERDLST RSKEFKEFDQ DFDSVLGKDS PAKFPGESGV 300
  301 VFPVGFGDES GAELEKDFPT RSHDFDMKTE TGMDTNSPSR SHEFDLKTES GNDKNSPMGF 360
  361 GSESGAELEK EFDQKNDSGR NEYSPESDGG LGAPLGGNFP VRSHELDLKN ESDIDKDVPT 420
  421 GFDGEPDFLA KGRPGYGEAS EEDKFPARSD DVEVETELGR DPKTETLDQF SPELSHPKER 480
  481 DEFKESRDDF EETRDEKTEE PKQSTYTEKF ASMLGYSGEI PVGDQTQVAG TVDEKLTPVN 540
  541 EKDQETESAV TTKLPISGGG SGVEEQRGED KSVSGRDYVA EKLTTEEEDK AFSDMVAEKL 600
  601 QIGGEEEKKE TTTKEVEKIS TEKAASEEGE AVEEEVKGGG GMVGRIKGWF GGGATDEVKP 660
  661 ESPHSVEEAP KSSGWFGGGA TEEVKPKSPH SVEESPQSLG STVVPVQKEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] MSA 2.208997 View MSA. No confident structure predictions are available.
    2 View Details [184..351] deduced N/A No confident structure predictions are available.
    3 View Details [352..569] deduced N/A No confident structure predictions are available.
    4 View Details [570..710] MSA 2.203994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle