YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ISPF_ARATH

General Information:
Name(s) found: ISPF_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    Biological Process: chlorophyll biosynthetic process [IMP]
    carotenoid biosynthetic process [IMP]
    isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway [ISS]
    Molecular Function: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSSTQLLL SSSSLFHSQI TKKPFLLPAT KIGVWRPKKS LSLSCRPSAS VSAASSAVDV  60
   61 NESVTSEKPT KTLPFRIGHG FDLHRLEPGY PLIIGGIVIP HDRGCEAHSD GDVLLHCVVD 120
  121 AILGALGLPD IGQIFPDSDP KWKGAASSVF IKEAVRLMDE AGYEIGNLDA TLILQRPKIS 180
  181 PHKETIRSNL SKLLGADPSV VNLKAKTHEK VDSLGENRSI AAHTVILLMK K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 65.30103 No description for 2pmpA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle