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Protein Overview: IAA12_ARATH

General Information:
Name(s) found: IAA12_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 239 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: root development [IMP]
    embryonic pattern specification [IMP]
    xylem and phloem pattern formation [IMP]
    response to auxin stimulus [IGI]
    Molecular Function: transcription factor activity [ISS]
    transcription repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVSELEVG KSNLPAESEL ELGLGLSLGG GAWKERGRIL TAKDFPSVGS KRSAESSSHQ  60
   61 GASPPRSSQV VGWPPIGLHR MNSLVNNQAM KAARAEEGDG EKKVVKNDEL KDVSMKVNPK 120
  121 VQGLGFVKVN MDGVGIGRKV DMRAHSSYEN LAQTLEEMFF GMTGTTCREK VKPLRLLDGS 180
  181 SDFVLTYEDK EGDWMLVGDV PWRMFINSVK RLRIMGTSEA SGLAPRRQEQ KDRQRNNPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] MSA 1.119992 View MSA. No confident structure predictions are available.
    2 View Details [91..239] FFAS03 1.24 Bud emergence mediator Bemp1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle