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View Structure Prediction Details

Protein: IAA12_ARATH
Organism: Arabidopsis thaliana
Length: 239 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IAA12_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593621 - gi|21593621|gb|AAM65588.1| putative auxin-induced protein, IAA12 [Arabidopsis thaliana]
273.0 [0..1] [239..1]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGVSELEVG KSNLPAESEL ELGLGLSLGG GAWKERGRIL TAKDFPSVGS KRSAESSSHQ  60
   61 GASPPRSSQV VGWPPIGLHR MNSLVNNQAM 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAARAEEGDG EKKVVKNDEL KDVSMKVNPK VQGLGFVKVN MDGVGIGRKV DMRAHSSYEN  60
   61 LAQTLEEMFF GMTGTTCREK VKPLRLLDGS SDFVLTYEDK EGDWMLVGDV PWRMFINSVK 120
  121 RLRIMGTSEA SGLAPRRQEQ KDRQRNNPV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.24
Match: 1ip9A
Description: Bud emergence mediator Bemp1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle