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Protein Overview: HAL3B_ARATH

General Information:
Name(s) found: HAL3B_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana GN=HAL3B PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: hyperosmotic salinity response [IEP]
    coenzyme A biosynthetic process [IMP]
    Molecular Function: phosphopantothenoylcysteine decarboxylase activity [IGI]
    FMN binding [ISS]
    electron carrier activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMEVDTVTR KPRILLAASG SVASIKFSNL CHCFSEWAEV KAVASKSSLN FVDKPSLPQN  60
   61 VTLYTDEDEW SSWNKIGDPV LHIELRRWAD VMIIAPLSAN TLAKIAGGLC DNLLTCIVRA 120
  121 WDYSKPLFVA PAMNTLMWNN PFTERHLVLL DELGITLIPP IKKKLACGDY GNGAMAEPSL 180
  181 IYSTVRLFWE SQARKQRDGT S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 60.09691 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphopantothenoylcysteine decarboxylase activity
    		•  3.86093811191169 bayes_pls_golite062009
  • phosphopantothenate--cysteine ligase activity
    		•  2.64345867885176 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.79168084682693 bayes_pls_golite062009
  • catalytic activity
    		•  1.51672397362026 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.03827559540394 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle