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Protein Overview: KNAT2_ARATH

General Information:
Name(s) found: KNAT2_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2 PE=1 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: specification of carpel identity [IMP]
    cytokinin mediated signaling pathway [IMP]
    response to ethylene stimulus [IGI]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS SELLPRIRKA  60
   61 EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC ILEEIQRENH VYKRDVAPLS 120
  121 CFGADPELDE FMETYCDILV KYKTDLARPF DEATTFINKI EMQLQNLCTG PASATALSDD 180
  181 GAVSSDEELR EDDDIAADDS QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE 240
  241 ARQALLDWWN VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM 300
  301 DDSNETFFTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] MSA 1.626992 View MSA. No confident structure predictions are available.
    2 View Details [117..310] PSI-BLAST 4.30103 Hepatocyte nuclear factor 1a (LFB1/HNF1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.971797124886045 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.74904610690468 bayes_pls_golite062009
  • DNA binding
    		•  0.73457854282882 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle