| Protein: | KNAT2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 310 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KNAT2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
228.0 | [0..1] | [310..1] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS SELLPRIRKA 60
61 EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC ILEEIQRENH VYKRDV
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [117-310] |
1 11 21 31 41 51
| | | | | |
1 APLSCFGADP ELDEFMETYC DILVKYKTDL ARPFDEATTF INKIEMQLQN LCTGPASATA 60
61 LSDDGAVSSD EELREDDDIA ADDSQQRSND RDLKDQLLRK FGSHISSLKL EFSKKKKKGK 120
121 LPREARQALL DWWNVHNKWP YPTEGDKISL AEETGLDQKQ INNWFINQRK RHWKPSENMP 180
181 FDMMDDSNET FFTE
|
| Detection Method: | |
| Confidence: | 4.30103 |
| Match: | 1ic8A |
| Description: | Hepatocyte nuclear factor 1a (LFB1/HNF1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.971797124886045 | bayes_pls_golite062009 |
| nucleic acid binding | 0.74904610690468 | bayes_pls_golite062009 |
| DNA binding | 0.73457854282882 | bayes_pls_golite062009 |
