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Protein Overview: HAT2_ARATH

General Information:
Name(s) found: HAT2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8809620|dbj|BAA97171.1| homeobox-leucine zipper protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|18857720|emb|CAD24013.1| homeodomain-leucine zipper protein HAT2 [Arabidopsis thaliana] [NCBI NR]
  • gi|16974455|gb|AAL31231.1| AT5g47370/MQL5_23 [Arabidopsis thaliana] [NCBI NR]
  • gi|16226634|gb|AAL16219.1|AF428450_1 AT5g47370/MQL5_23 [Arabidopsis thaliana] [NCBI NR]
  • gi|15450447|gb|AAK96517.1| AT5g47370/MQL5_23 [Arabidopsis thaliana] [NCBI NR]
  • gi|15238078|ref|NP_199548.1| HAT2; DNA binding / transcription factor/ transcription repressor [Arabidopsis thaliana] [NCBI NR]
  • gi|15208392|dbj|BAB63202.1| homeodomain leucine-zipper protein HAT2 [Arabidopsis thaliana] [NCBI NR]
  • gi|12643283|sp|P46601.2|HAT2_ARATH RecName: Full=Homeobox-leucine zipper protein HAT2; AltName: Full=Homeodomain-leucine zipper protein HAT2; Short=HD-ZIP protein 2 [NCBI NR]
  • Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=1 SV=2 [Swiss-Prot]
  • (P46601) Homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2) [athaliana3702.FASTAC.txt]
  • homeobox-leucine zipper protein-like [Arabidopsis thaliana]gi|16974455|gb|AAL31231.1| AT5g47370/MQL5_23 [Arabidopsis thaliana]gi|15208392|dbj|BAB63202.1| homeodomain leucine-zipper protein HAT2 [Arabidopsis thaliana]gi|16226634|gb|AAL16219.1| AT5g47370 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Homeobox-leucine zipper protein HAT2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: HAT2 | HAT2; transcription factor | chr5:19233709-19234874 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT5g47370/MQL5_23 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • HAT2; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • homeodomain-leucine zipper protein HAT2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • homeodomain leucine-zipper protein HAT2 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • homeobox-leucine zipper protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2) [nr-271106-contam.fasta]
  • | Symbols: HAT2 | Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein | chr5:19216482-19217647 REVERSE LENGTH=283 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: unidimensional cell growth [IMP]
    regulation of transcription, DNA-dependent [ISS]
    shade avoidance [IEP]
    auxin mediated signaling pathway [IEP]
    response to auxin stimulus [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    transcription repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMGKEDLGL SLSLGFSQNH NPLQMNLNPN SSLSNNLQRL PWNQTFDPTS DLRKIDVNSF  60
   61 PSTVNCEEDT GVSSPNSTIS STISGKRSER EGISGTGVGS GDDHDEITPD RGYSRGTSDE 120
  121 EEDGGETSRK KLRLSKDQSA FLEETFKEHN TLNPKQKLAL AKKLNLTARQ VEVWFQNRRA 180
  181 RTKLKQTEVD CEYLKRCVEK LTEENRRLQK EAMELRTLKL SPQFYGQMTP PTTLIMCPSC 240
  241 ERVGGPSSSN HHHNHRPVSI NPWVACAGQV AHGLNFEALR PRS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] Pfam 46.619789 No description for PF04618.3 was found. No confident structure predictions are available.
    2 View Details [110..214] PSI-BLAST 23.0 Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA
    3 View Details [215..283] MSA 4.066996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle