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Protein Overview: HAT1_ARATH

General Information:
Name(s) found: HAT1_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||B71444 homeobox protein HAT1 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|7268498|emb|CAB78749.1| homeobox-leucine zipper protein HAT1 (hd-zip protein 1) [Arabidopsis thaliana] [NCBI NR]
  • gi|549884|gb|AAA56899.1| homeobox protein [NCBI NR]
  • gi|549883|gb|AAA56898.1| homeobox protein [NCBI NR]
  • gi|29824273|gb|AAP04097.1| putative homeobox-leucine zipper protein HAT1 (HD-Zip protein 1) [Arabidopsis thaliana] [NCBI NR]
  • gi|28973688|gb|AAO64161.1| putative homeobox-leucine zipper protein HAT1 (HD-Zip protein 1) [Arabidopsis thaliana] [NCBI NR]
  • gi|2245105|emb|CAB10527.1| homeobox-leucine zipper protein HAT1 (hd-zip protein 1) [Arabidopsis thaliana] [NCBI NR]
  • gi|20145863|emb|CAD29651.1| homeodomain-leucine zipper protein HAT1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15236076|ref|NP_193476.1| HAT1; DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|1170168|sp|P46600.1|HAT1_ARATH RecName: Full=Homeobox-leucine zipper protein HAT1; AltName: Full=Homeodomain-leucine zipper protein HAT1; Short=HD-ZIP protein 1 [NCBI NR]
  • gi|110737101|dbj|BAF00502.1| homeobox-leucine zipper protein HAT1 [Arabidopsis thaliana] [NCBI NR]
  • Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1 [Swiss-Prot]
  • (P46600) Homeobox-leucine zipper protein HAT1 (HD-ZIP protein 1) [athaliana3702.FASTAC.txt]
  • putative homeobox-leucine zipper protein HAT1 (HD-Zip protein 1) [Arabidopsis thaliana]gi|28973688|gb|AAO64161.1| putative homeobox-leucine zipper protein HAT1 (HD-Zip protein 1) [Arabidopsis thaliana]gi|7268498|emb|CAB78749.1| homeobox-leucine zipper p [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Homeobox-leucine zipper protein HAT1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: HAT1 | HAT1 (homeobox-leucine zipper protein 1); DNA binding / transcription factor | chr4:9739874-9740995 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • homeobox-leucine zipper protein HAT1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • homeobox-leucine zipper protein HAT1 (hd-zip protein 1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • homeobox protein [nr-271106-contam.fasta]
  • putative homeobox-leucine zipper protein HAT1 (HD-Zip protein 1) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Homeobox-leucine zipper protein HAT1 (HD-ZIP protein 1) [nr-271106-contam.fasta]
  • homeodomain-leucine zipper protein HAT1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • HAT1; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: HAT1 | Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein | chr4:9739862-9740983 FORWARD LENGTH=282 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: transcription [IEA]
    regulation of transcription, DNA-dependent [IEA][ISS]
    regulation of transcription [IEA]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMGKEDLGL SLSLGFAQNH PLQLNLKPTS SPMSNLQMFP WNQTLVSSSD QQKQQFLRKI  60
   61 DVNSLPTTVD LEEETGVSSP NSTISSTVSG KRRSTEREGT SGGGCGDDLD ITLDRSSSRG 120
  121 TSDEEEDYGG ETCRKKLRLS KDQSAVLEDT FKEHNTLNPK QKLALAKKLG LTARQVEVWF 180
  181 QNRRARTKLK QTEVDCEYLK RCVEKLTEEN RRLEKEAAEL RALKLSPRLY GQMSPPTTLL 240
  241 MCPSCERVAG PSSSNHNQRS VSLSPWLQMA HGSTFDVMRP RS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] Pfam 52.119186 No description for PF04618.3 was found. No confident structure predictions are available.
    2 View Details [125..204] PSI-BLAST 25.045757 Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA
    3 View Details [205..282] MSA 2.280993 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle