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Protein Overview: GPDL4_ARATH

General Information:
Name(s) found: GPDL4_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana GN=GDPDL4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 766 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    anchored to plasma membrane [IDA]
    anchored to membrane [TAS]
    Biological Process: glycerol metabolic process [ISS]
    plant-type cell wall cellulose metabolic process [IGI]
    guard cell morphogenesis [IGI]
    trichome differentiation [IGI]
    Molecular Function: phosphoric diester hydrolase activity [IEA]
    glycerophosphodiester phosphodiesterase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG  60
   61 LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD VKMMNASNIQ DVYPKRKTSY 120
  121 LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL 180
  181 NVQHDAFYAQ HNLSMSSFLL SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK 240
  241 DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV 300
  301 YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPLTASSAVD CFSHLGSNAS 360
  361 SQVDFLVISK NGASGDYPGC TDLAYTKAIK DGADVIDCSL QMSSDGIPFC LSSINLGEST 420
  421 NVVQSPFRNR STTVPEIGSL PGIYSFSLAW SEIQTLRPAI ENPYSREFTM FRNPRERSSG 480
  481 KFVSLSDFLN LAKNSSSLTG VLISVENATY LREKQGLDAV KAVLDTLTEA GYSNKTTTTR 540
  541 VMIQSTNSSV LIDFKKQSRY ETVYKVEETI RDILDTAIED IKKFADAVVI SKKSVFPTSE 600
  601 SFTTGQTKLV ERLQKFQLPV YVEVFRNEFV SQPWDFFADA TVEINSHVTG AGINGTITEF 660
  661 PLTAARYKRN SCLTRKDVPP YMIPVQPAGL LTIVSPASLP PAEAPSPVFT DADVTEPPLP 720
  721 PVSARAPTTT PGPQSTGEKS PNGQTRVALS LLLSAFATVF ASLLLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..343] FFAS03 7.42 Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli
    2 View Details [344..677] PSI-BLAST 64.69897 Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
    3 View Details [678..766] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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