| Protein: | GPDL4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 766 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPDL4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
530.0 | [0..5] | [766..7] |
|
|
498.0 | [0..10] | [766..1] |
|
|
477.0 | [0..34] | [765..38] |
|
|
473.0 | [0..4] | [761..1] |
|
Region A: Residues: [1-343] |
1 11 21 31 41 51
| | | | | |
1 MINMRDNPTM HVLQASKFLF LALILIQLLS TQLFAQRSKS PWQTLTGDAP LVIARGGFSG 60
61 LLPDSSLDAY SFVSQTSVPG AVLWCDVQLT KDAIGLCFPD VKMMNASNIQ DVYPKRKTSY 120
121 LLNGVPTQDW FTIDFNFKDL TKVILKQGIL SRSAAFDGNS YGISTVKDIS TQLKPEGFWL 180
181 NVQHDAFYAQ HNLSMSSFLL SISKTVIIDY LSSPEVNFFR NIGRRFGRNG PKFVFRFLEK 240
241 DDVEVSTNQT YGSLAGNLTF LKTFASGVLV PKSYIWPIES QYLLPRTSFV QDAHKAGLEV 300
301 YASGFGNDFD LAYNYSFDPL AEYLSFMDNG DFSVDGLLSD FPL
|
| Detection Method: |  |
| Confidence: | 7.42 |
| Match: | 1ydyA |
| Description: | Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [344-677] |
1 11 21 31 41 51
| | | | | |
1 TASSAVDCFS HLGSNASSQV DFLVISKNGA SGDYPGCTDL AYTKAIKDGA DVIDCSLQMS 60
61 SDGIPFCLSS INLGESTNVV QSPFRNRSTT VPEIGSLPGI YSFSLAWSEI QTLRPAIENP 120
121 YSREFTMFRN PRERSSGKFV SLSDFLNLAK NSSSLTGVLI SVENATYLRE KQGLDAVKAV 180
181 LDTLTEAGYS NKTTTTRVMI QSTNSSVLID FKKQSRYETV YKVEETIRDI LDTAIEDIKK 240
241 FADAVVISKK SVFPTSESFT TGQTKLVERL QKFQLPVYVE VFRNEFVSQP WDFFADATVE 300
301 INSHVTGAGI NGTITEFPLT AARYKRNSCL TRKD
|
| Detection Method: | |
| Confidence: | 64.69897 |
| Match: | 1t8qA |
| Description: | Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [678-766] |
1 11 21 31 41 51
| | | | | |
1 VPPYMIPVQP AGLLTIVSPA SLPPAEAPSP VFTDADVTEP PLPPVSARAP TTTPGPQSTG 60
61 EKSPNGQTRV ALSLLLSAFA TVFASLLLL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
