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Protein Overview: gi|218201409

General Information:
Name(s) found: gi|218201409 [NCBI NR]
Description(s) found:
  • gi|218201409|gb|EEC83836.1| hypothetical protein OsI_29787 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 778 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSSWGGGG GGGGGAVRLW CCGLLLMLLS GGGGGGGAAA QRPPAYKTLS GNAPIVIAEG  60
   61 GFSGVFPDSS KNAYVFALSS TSGDTVLWCN VQLTKDGVGI CLRDLLMDNC TSISQAYRAG 120
  121 KKAYLVNGEE KKGWFPIDYT MSSLQSVILT QAIWSRTDKF DFAFLPILPV TNVIDLAKPS 180
  181 SVWLNIEHDI FYRQHGLNMT KYILSIPKGG SVQYISSPEL GFLQSISGRV NRKTKLVFRF 240
  241 LDATSSDPSS NQTYGSLLSN LTFIKTVASG IMVPKEYIWP VTTNNYIQPA KSIVRDAHSA 300
  301 GLEIYASDFA NDRIIPYNYS YDPLEEYLHF VGSDNFSVDG VLSEFPLTAA AAIGCFTNLN 360
  361 VSSKTDHGSP LIISHNGASG DYPDCTDLAY QKAVDDGADV IDCSIQMTSD GVPVCMSSIN 420
  421 LFETTNVQRT PFSNRASIFK DIQPTPGIFT FNLTWADISS SDLRPKISSP ESIYYLVRNP 480
  481 VHKNAGNFFR LSDFLTFAKD KDLSGIMIII KNAVFMANSL GFDVVDSVTK ALSDAGYNNQ 540
  541 TTKAKEVMIQ SEDSAVLVNL KQLETKYKLV YTLPSTIGDA SASSLVDVKK FADAVIVDRE 600
  601 SIFPESQGFI MKETNLVKDL RSAGLAIYAQ VFRNEFVSPP WDFFSDVTVE INSYVQSVNI 660
  661 DGIITDFPKT VRRYKMNSCT GLGVNMPSYM NPAEIGGLAQ LLNGSQAQPP ALAPMPVLNS 720
  721 SDVTEPPFPS AAPKNAPGGA ANGSTPAPGA SPSGSQAAAV MRAGILPMVT ALFASLLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..348] PSI-BLAST 44.522879 No description for 2otdA was found.
    2 View Details [349..683] PSI-BLAST 62.221849 Structural genomics, Crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
    3 View Details [684..778] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle