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Protein Overview: GL1_ARATH

General Information:
Name(s) found: GL1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|6429179|dbj|BAA86879.1| GL1 [Arabidopsis thaliana] [NCBI NR]
  • gi|41619256|gb|AAS10060.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|20162513|gb|AAM14620.1|AF495524_1 R2R3-MYB transcription factor GL1 [Arabidopsis thaliana] [NCBI NR]
  • gi|17865662|sp|P27900.2|GL1_ARATH RecName: Full=Trichome differentiation protein GL1; AltName: Full=Protein GLABROUS 1; AltName: Full=Protein GLABRA 1; AltName: Full=R2R3-MYB transcription factor GL1; AltName: Full=Myb-related protein 0; Short=AtMYB0 [NCBI NR]
  • gi|15529316|gb|AAL01222.1|AF263697_1 glabrous 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15529314|gb|AAL01221.1|AF263696_1 glabrous 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15529312|gb|AAL01220.1|AF263695_1 glabrous 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15529310|gb|AAL01219.1|AF263694_1 glabrous 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15529308|gb|AAL01218.1|AF263693_1 glabrous 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15529302|gb|AAL01215.1|AF263690_1 glabrous 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|15232860|ref|NP_189430.1| ATMYB0 (MYB DOMAIN PROTEIN 0); DNA binding / protein binding / transcription activator/ transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|11994497|dbj|BAB02538.1| trichome differentiation protein GL1 [Arabidopsis thaliana] [NCBI NR]
  • Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2 [Swiss-Prot]
  • (P27900) Trichome differentiation protein GL1 (GLABROUS1 protein) [athaliana3702.FASTAC.txt]
  • trichome differentiation protein GL1 [Arabidopsis thaliana]gi|6429179|dbj|BAA86879.1| GL1 [Arabidopsis thaliana]gi|20162513|gb|AAM14620.1| R2R3-MYB transcription factor GL1 [Arabidopsis thaliana]gi|15529316|gb|AAL01222.1| glabrous 1 [Arabidopsis thalia [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Trichome differentiation protein GL1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATMYB0, AtGL1, GL1 | GL1 (GLABRA 1); transcription factor | chr3:10363182-10364743 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • R2R3-MYB transcription factor GL1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • trichome differentiation protein GL1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GL1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Trichome differentiation protein GL1 (GLABROUS1 protein) (R2R3-MYB transcription factor GL1) [nr-271106-contam.fasta]
  • MYB transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • glabrous 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GL1 (GLABRA 1); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GL1, ATMYB0, ATGL1, MYB0 | myb domain protein 0 | chr3:10361945-10363506 REVERSE LENGTH=228 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 228 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: regulation of protein localization [IMP]
    gibberellic acid mediated signaling pathway [TAS]
    cell fate specification [IMP]
    trichome patterning [IMP]
    Molecular Function: DNA binding [IDA]
    transcription factor activity [ISS][TAS]
    protein binding [IPI]
    transcription activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRRRDEKE NQEYKKGLWT VEEDNILMDY VLNHGTGQWN RIVRKTGLKR CGKSCRLRWM  60
   61 NYLSPNVNKG NFTEQEEDLI IRLHKLLGNR WSLIAKRVPG RTDNQVKNYW NTHLSKKLVG 120
  121 DYSSAVKTTG EDDDSPPSLF ITAATPSSCH HQQENIYENI AKSFNGVVSA SYEDKPKQEL 180
  181 AQKDVLMATT NDPSHYYGNN ALWVHDDDFE LSSLVMMNFA SGDVEYCL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 31.69897 c-Myb, DNA-binding domain
    2 View Details [126..228] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle