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Protein Overview: FTSH1_ARATH

General Information:
Name(s) found: FTSH1_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 716 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    thylakoid lumen [IDA]
    membrane [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: photosystem II repair [TAS]
    PSII associated light-harvesting complex II catabolic process [TAS]
    Molecular Function: ATPase activity [ISS]
    protein binding [IPI]
    ATP-dependent peptidase activity [ISS]
    metallopeptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNSLLRSS SNFFLGSHII ISSPTPKTTR KPSFPFSFVS RAKYQITRSS QDENSPNGKP  60
   61 NSPFSSQVAL AAILLSSISS SPLALAVVDE PASPSVVIES QAVKPSTPSP LFIQNEILKA 120
  121 PSPKSSDLPE GSQWRYSEFL NAVKKGKVER VRFSKDGSVV QLTAVDNRRA SVIVPNDPDL 180
  181 IDILAMNGVD ISVSEGESSG NDLFTVIGNL IFPLLAFGGL FLLFRRAQGG PGGGPGGLGG 240
  241 PMDFGRSKSK FQEVPETGVS FADVAGADQA KLELQEVVDF LKNPDKYTAL GAKIPKGCLL 300
  301 VGPPGTGKTL LARAVAGEAG VPFFSCAASE FVELFVGVGA SRVRDLFEKA KSKAPCIVFI 360
  361 DEIDAVGRQR GAGMGGGNDE REQTINQLLT EMDGFSGNSG VIVLAATNRP DVLDSALLRP 420
  421 GRFDRQVTVD RPDVAGRVKI LQVHSRGKAL GKDVDFDKVA RRTPGFTGAD LQNLMNEAAI 480
  481 LAARRELKEI SKDEISDALE RIIAGPEKKN AVVSEEKKRL VAYHEAGHAL VGALMPEYDP 540
  541 VAKISIIPRG QAGGLTFFAP SEERLESGLY SRSYLENQMA VALGGRVAEE VIFGDENVTT 600
  601 GASNDFMQVS RVARQMIERF GFSKKIGQVA VGGPGGNPFM GQQMSSQKDY SMATADIVDA 660
  661 EVRELVEKAY KRATEIITTH IDILHKLAQL LIEKETVDGE EFMSLFIDGQ AELYIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] deduced N/A No confident structure predictions are available.
    2 View Details [132..247] Pfam 23.180456 No description for PF06480.6 was found. No confident structure predictions are available.
    3 View Details [248..716] PSI-BLAST 125.0 EDTA treated


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.34

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle