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Protein Overview: FPPS2_ARATH

General Information:
Name(s) found: FPPS2_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • Farnesyl pyrophosphate synthase 2 OS=Arabidopsis thaliana GN=FPS2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: farnesyl diphosphate biosynthetic process [IGI][ISS]
    Molecular Function: geranyltranstransferase activity [IGI]
    dimethylallyltranstransferase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLKSTFLD VYSVLKSDLL QDPSFEFTHE SRQWLERMLD YNVRGGKLNR GLSVVDSYKL  60
   61 LKQGQDLTEK ETFLSCALGW CIEWLQAYFL VLDDIMDNSV TRRGQPCWFR KPKVGMIAIN 120
  121 DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL 180
  181 QIHRRIVEYK TAYYSFYLPV ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD 240
  241 PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE 300
  301 GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..342] PSI-BLAST 80.0 STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • prenyltransferase activity
    		•  8.01554498091556 bayes_pls_golite062009
  • farnesyl-diphosphate farnesyltransferase activity
    		•  5.04441642023356 bayes_pls_golite062009
  • protein prenyltransferase activity
    		•  4.13910090627719 bayes_pls_golite062009
  • geranyltranstransferase activity
    		•  3.86169009960142 bayes_pls_golite062009
  • transferase activity
    		•  3.63071481728466 bayes_pls_golite062009
  • farnesyltranstransferase activity
    		•  3.11591733497708 bayes_pls_golite062009
  • protein farnesyltransferase activity
    		•  2.85107079482202 bayes_pls_golite062009
  • catalytic activity
    		•  2.4040324437254 bayes_pls_golite062009
  • dimethylallyltranstransferase activity
    		•  1.91559289231283 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.82540911622956 bayes_pls_golite062009
  • binding
    		•  1.45201203247999 bayes_pls_golite062009
  • protein binding
    		•  0.270583155998354 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle