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Protein Overview: FKB18_ARATH

General Information:
Name(s) found: FKB18_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Peptidyl-prolyl cis-trans isomerase FKBP18, chloroplastic OS=Arabidopsis thaliana GN=FKBP18 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 232 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    thylakoid lumen [IDA]
    chloroplast thylakoid lumen [IDA][ISS]
    Biological Process: protein folding [IEA]
    Molecular Function: peptidyl-prolyl cis-trans isomerase activity [ISS]
    FK506 binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISSLHRW ASNQHSRLPR ITSISEADQS RPINQVVAFS VPISRRDASI ILLSSIPLTS  60
   61 FFVLTPSSSE ARERRSRKVI PLEEYSTGPE GLKFYDIEEG KGPVATEGST AQVHFDCRYR 120
  121 SITAISTRES KLLAGNRSIA QPYEFKVGST PGKERKREFV DNPNGLFSAQ AAPKPPPAMY 180
  181 FITEGMKVGG KRTVIVPPEA GYGQKGMNEI PPGATFELNI ELLRVTPPPE EK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] PSI-BLAST 42.30103 Macrophage infectivity potentiator protein (MIP)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.355223926248969 bayes_pls_golite062009
  • isomerase activity
    		•  0.11136303327967 bayes_pls_golite062009
  • cis-trans isomerase activity
    		•  0.0710660189922594 bayes_pls_golite062009
  • peptidyl-prolyl cis-trans isomerase activity
    		•  0.0709473849313795 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.39

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle