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Protein Overview: FAD3E_ARATH

General Information:
Name(s) found: FAD3E_ARATH [Swiss-Prot]
Description(s) found:
Found 23 descriptions.
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  • Acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IMP]
    Biological Process: unsaturated fatty acid biosynthetic process [IMP]
    Molecular Function: omega-3 fatty acid desaturase activity [IGI][IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVAMDQRTN VNGDPGAGDR KKEERFDPSA QPPFKIGDIR AAIPKHCWVK SPLRSMSYVV  60
   61 RDIIAVAALA IAAVYVDSWF LWPLYWAAQG TLFWAIFVLG HDCGHGSFSD IPLLNSVVGH 120
  121 ILHSFILVPY HGWRISHRTH HQNHGHVEND ESWVPLPERV YKKLPHSTRM LRYTVPLPML 180
  181 AYPLYLCYRS PGKEGSHFNP YSSLFAPSER KLIATSTTCW SIMFVSLIAL SFVFGPLAVL 240
  241 KVYGVPYIIF VMWLDAVTYL HHHGHDEKLP WYRGKEWSYL RGGLTTIDRD YGIFNNIHHD 300
  301 IGTHVIHHLF PQIPHYHLVD ATKAAKHVLG RYYREPKTSG AIPIHLVESL VASIKKDHYV 360
  361 SDTGDIVFYE TDPDLYVYAS DKSKIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] MSA 11.761996 View MSA. No confident structure predictions are available.
    2 View Details [127..276] MSA 1.761996 View MSA. No confident structure predictions are available.
    3 View Details [277..386] FFAS03 0.972 Structure of the thiazole synthase/ThiS complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.26200642311221 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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