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Protein Overview: FAD3C_ARATH

General Information:
Name(s) found: FAD3C_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic OS=Arabidopsis thaliana GN=FAD7 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 446 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA][ISS][NAS]
    plastid membrane [TAS]
    chloroplast envelope [IDA]
    Biological Process: response to cold [IMP]
    fatty acid biosynthetic process [IMP]
    Molecular Function: omega-3 fatty acid desaturase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLVLSECG IRPLPRIYTT PRSNFLSNNN KFRPSLSSSS YKTSSSPLSF GLNSRDGFTR  60
   61 NWALNVSTPL TTPIFEESPL EEDNKQRFDP GAPPPFNLAD IRAAIPKHCW VKNPWKSLSY 120
  121 VVRDVAIVFA LAAGAAYLNN WIVWPLYWLA QGTMFWALFV LGHDCGHGSF SNDPKLNSVV 180
  181 GHLLHSSILV PYHGWRISHR THHQNHGHVE NDESWHPMSE KIYNTLDKPT RFFRFTLPLV 240
  241 MLAYPFYLWA RSPGKKGSHY HPDSDLFLPK ERKDVLTSTA CWTAMAALLV CLNFTIGPIQ 300
  301 MLKLYGIPYW INVMWLDFVT YLHHHGHEDK LPWYRGKEWS YLRGGLTTLD RDYGLINNIH 360
  361 HDIGTHVIHH LFPQIPHYHL VEATEAAKPV LGKYYREPDK SGPLPLHLLE ILAKSIKEDH 420
  421 YVSDEGEVVY YKADPNLYGE VKVRAD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] deduced N/A No confident structure predictions are available.
    2 View Details [105..217] MSA 8.453996 View MSA. No confident structure predictions are available.
    3 View Details [218..446] MSA 5.445996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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