YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ERF1Y_ARATH

General Information:
Name(s) found: ERF1Y_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|8698738|gb|AAF78496.1|AC012187_16 Identical to an omnipotent supressor protein SUP1 homolog (fragment) from Arabidopsis thaliana gi|322525 and is a member of the eRF1 PF|01605 family. ESTs gb|Z18188, gb|H36000, gb|AA651147, gb|W43754 come from this ge [NCBI NR]
  • pir||H86262 Eukaryotic peptide chain release factor chain 1-2 - Arabidopsis thaliana [NCBI NR]
  • gi|21554757|gb|AAM63682.1| eukaryotic peptide chain release factor subunit 1, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|18206253|sp|Q9LPV8.1|ERF1Y_ARATH RecName: Full=Eukaryotic peptide chain release factor subunit 1-2; Short=Eukaryotic release factor 1-2; Short=eRF1-2; AltName: Full=Omnipotent suppressor protein 1 homolog 2; Short=SUP1 homolog 2 [NCBI NR]
  • gi|15222115|ref|NP_172752.1| ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2); translation release factor [Arabidopsis thaliana] [NCBI NR]
  • gi|14334580|gb|AAK59469.1| putative eukaryotic peptide chain release factor subunit 1 [Arabidopsis thaliana] [NCBI NR]
  • gi|109946605|gb|ABG48481.1| At1g12920 [Arabidopsis thaliana] [NCBI NR]
  • (Q9LPV8) Eukaryotic peptide chain release factor subunit 1-2 (eRF1-2) (Eukaryotic release factor 1-2) (Omnipotent suppressor protein 1 homolog 2) (SUP1 homolog 2) [Swiss-Prot]
  • Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=1 SV=1 [Swiss-Prot]
  • eukaryotic peptide chain release factor subunit 1, putative [Arabidopsis thaliana]gi|14334580|gb|AAK59469.1| putative eukaryotic peptide chain release factor subunit 1 [Arabidopsis thaliana]gi|8698738|gb|AAF78496.1| Identical to an omnipotent supressor [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Eukaryotic peptide chain release factor subunit 1-2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ERF1-2 | ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2); translation release factor | chr1:4396553-4397857 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • eukaryotic peptide chain release factor subunit 1, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative eukaryotic peptide chain release factor subunit 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Identical to an omnipotent supressor protein SUP1 homolog (fragment) from Arabidopsis thaliana gi|322525 and is a member of the eRF1 PF|01605 family. ESTs gb|Z18188, gb|H36000, gb|AA651147, gb|W43754 come from this gene [nr-271106-contam.fasta]
  • Eukaryotic peptide chain release factor subunit 1-2 (eRF1-2) (Eukaryotic release factor 1-2) (Omnipotent suppressor protein 1 homolog 2) (SUP1 homolog 2) [nr-271106-contam.fasta]
  • At1g12920 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ERF1-2 (EUKARYOTIC RELEASE FACTOR 1-2); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ERF1-2 | eukaryotic release factor 1-2 | chr1:4396555-4397859 REVERSE LENGTH=434 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Eukaryotic peptide chain release factor subunit 1-2 OS=Arabidopsis thaliana GN=ERF1-2 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: translation release factor complex [TAS]
    plasma membrane [IDA]
    Biological Process: translational termination [IGI][ISS]
    Molecular Function: translation release factor activity [IGI][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK  60
   61 SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND DGKEKKVTFD FEPFRPINAS 120
  121 LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG 180
  181 GQSALRFARL RMEKRHNYVR KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL 240
  241 FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY 300
  301 VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE 360
  361 TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ FCRGFGGIGG MLRYQLDMRT 420
  421 FDELSDTEVY EDSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..434] PSI-BLAST 167.0 Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation release factor activity
    		•  11.5102558694213 bayes_pls_golite062009
  • translation termination factor activity
    		•  11.4768548464911 bayes_pls_golite062009
  • translation release factor activity, codon specific
    		•  7.66455753522311 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.97154934968642 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.70960972397471 bayes_pls_golite062009
  • structural molecule activity
    		•  2.64319832043379 bayes_pls_golite062009
  • binding
    		•  2.24516466558786 bayes_pls_golite062009
  • translation regulator activity
    		•  1.83257472130927 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  1.81472167858216 bayes_pls_golite062009
  • RNA binding
    		•  1.59103459949328 bayes_pls_golite062009
  • mRNA binding
    		•  0.607146672130391 bayes_pls_golite062009
  • protein binding
    		•  0.381324299701367 bayes_pls_golite062009
  • catalytic activity
    		•  0.264002643439785 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle