| Protein: | ERF1Y_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 434 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF1Y_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
582.0 | [0..1] | [434..1] |
|
Region A: Residues: [1-434] |
1 11 21 31 41 51
| | | | | |
1 MAEEADTNIE IWKIKKLIKG LESARGNGTS MISLIMPPRD QVSRVTKMLG DEYGTASNIK 60
61 SRVNRQSVLS AITSAQQRLK LYNKVPTNGL VLYTGTIVND DGKEKKVTFD FEPFRPINAS 120
121 LYLCDNKFHT EALNELLESD DKFGFIVMDG NGTLFGTLSG NTREVLHKFT VDLPKKHGRG 180
181 GQSALRFARL RMEKRHNYVR KTAELATQFY INPATSQPNV SGLILAGSAD FKTELSQSEL 240
241 FDPRLQAKIL NVVDVSYGGE NGFNQAIELS AEILSNVKFI QEKKLIGKYF EEISQDTGKY 300
301 VFGVEDTLKA LEMGAIETLI VWENLDINRY ELKNSTTGEM VVKHFGKDQE SDTSNFHDSE 360
361 TNAELEVQEK MPLLEWFANE YKRFGCTLEF VTNKSQEGSQ FCRGFGGIGG MLRYQLDMRT 420
421 FDELSDTEVY EDSD
|
| Detection Method: |  |
| Confidence: | 167.0 |
| Match: | 1dt9A |
| Description: | Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation release factor activity | 11.5102558694213 | bayes_pls_golite062009 |
| translation termination factor activity | 11.4768548464911 | bayes_pls_golite062009 |
| translation release factor activity, codon specific | 7.66455753522311 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.97154934968642 | bayes_pls_golite062009 |
| nucleic acid binding | 2.70960972397471 | bayes_pls_golite062009 |
| structural molecule activity | 2.64319832043379 | bayes_pls_golite062009 |
| binding | 2.24516466558786 | bayes_pls_golite062009 |
| translation regulator activity | 1.83257472130927 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.81472167858216 | bayes_pls_golite062009 |
| RNA binding | 1.59103459949328 | bayes_pls_golite062009 |
| mRNA binding | 0.607146672130391 | bayes_pls_golite062009 |
| protein binding | 0.381324299701367 | bayes_pls_golite062009 |
| catalytic activity | 0.264002643439785 | bayes_pls_golite062009 |
