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Protein Overview: EF102_ARATH

General Information:
Name(s) found: EF102_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IC][TAS]
    Biological Process: response to cold [IEP]
    regulation of transcription, DNA-dependent [IDA]
    ethylene mediated signaling pathway [TAS]
    response to chitin [IEP]
    Molecular Function: DNA binding [TAS]
    transcription factor activity [ISS][TAS]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPNEVSAL WFIEKHLLDE ASPVATDPWM KHESSSATES SSDSSSIIFG SSSSSFAPID  60
   61 FSESVCKPEI IDLDTPRSME FLSIPFEFDS EVSVSDFDFK PSNQNQNQFE PELKSQIRKP 120
  121 PLKISLPAKT EWIQFAAENT KPEVTKPVSE EEKKHYRGVR QRPWGKFAAE IRDPNKRGSR 180
  181 VWLGTFDTAI EAARAYDEAA FRLRGSKAIL NFPLEVGKWK PRADEGEKKR KRDDDEKVTV 240
  241 VEKVLKTEQS VDVNGGETFP FVTSNLTELC DWDLTGFLNF PLLSPLSPHP PFGYSQLTVV 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] MSA 1.189993 View MSA. No confident structure predictions are available.
    2 View Details [118..300] PSI-BLAST 27.30103 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle