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Protein Overview: ELF3_ARATH

General Information:
Name(s) found: ELF3_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T02630 hypothetical protein At2g25930 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|3413719|gb|AAC31242.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|28201800|sp|O82804.1|ELF3_ARATH RecName: Full=Protein EARLY FLOWERING 3; AltName: Full=Nematode-responsive protein [NCBI NR]
  • gi|20197364|gb|AAM15042.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15225220|ref|NP_180164.1| ELF3 (EARLY FLOWERING 3); protein C-terminus binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Protein EARLY FLOWERING 3 OS=Arabidopsis thaliana GN=ELF3 PE=1 SV=1 [Swiss-Prot]
  • (O82804) EARLY FLOWERING 3 protein (Nematode responsive protein) [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|3413719|gb|AAC31242.1| unknown protein [Arabidopsis thaliana]gi|7487200|pir||T02630 hypothetical protein At2g25930 [imported] - Arabidopsis thalianagi|15225220|ref|NP_180164.1| hydroxyproline-rich glycoprotein f [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Splice Isoform 1 of EARLY FLOWERING 3 protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PYK20, ELF3 | ELF3 (EARLY FLOWERING 3) | chr2:11066537-11070256 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ELF3 (EARLY FLOWERING 3) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Protein EARLY FLOWERING 3 (Nematode-responsive protein) [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ELF3, PYK20 | hydroxyproline-rich glycoprotein family protein | chr2:11059459-11063178 FORWARD LENGTH=695 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 695 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: circumnutation [IMP]
    photoperiodism, flowering [IMP]
    response to cold [IEP]
    unidimensional cell growth [IMP]
    response to abscisic acid stimulus [IEP]
    regulation of flower development [IMP]
    red, far-red light phototransduction [IMP]
    circadian rhythm [IMP]
    response to auxin stimulus [IEP]
    Molecular Function: transcription factor activity [ISS]
    protein C-terminus binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRGKDEEKI LEPMFPRLHV NDADKGGPRA PPRNKMALYE QLSIPSQRFG DHGTMNSRSN  60
   61 NTSTLVHPGP SSQPCGVERN LSVQHLDSSA ANQATEKFVS QMSFMENVRS SAQHDQRKMV 120
  121 REEEDFAVPV YINSRRSQSH GRTKSGIEKE KHTPMVAPSS HHSIRFQEVN QTGSKQNVCL 180
  181 ATCSKPEVRD QVKANARSGG FVISLDVSVT EEIDLEKSAS SHDRVNDYNA SLRQESRNRL 240
  241 YRDGGKTRLK DTDNGAESHL ATENHSQEGH GSPEDIDNDR EYSKSRACAS LQQINEEASD 300
  301 DVSDDSMVDS ISSIDVSPDD VVGILGQKRF WRARKAIANQ QRVFAVQLFE LHRLIKVQKL 360
  361 IAASPDLLLD EISFLGKVSA KSYPVKKLLP SEFLVKPPLP HVVVKQRGDS EKTDQHKMES 420
  421 SAENVVGRLS NQGHHQQSNY MPFANNPPAS PAPNGYCFPP QPPPSGNHQQ WLIPVMSPSE 480
  481 GLIYKPHPGM AHTGHYGGYY GHYMPTPMVM PQYHPGMGFP PPGNGYFPPY GMMPTIMNPY 540
  541 CSSQQQQQQQ PNEQMNQFGH PGNLQNTQQQ QQRSDNEPAP QQQQQPTKSY PRARKSRQGS 600
  601 TGSSPSGPQG ISGSKSFRPF AAVDEDSNIN NAPEQTMTTT TTTTRTTVTQ TTRDGGGVTR 660
  661 VIKVVPHNAK LASENAARIF QSIQEERKRY DSSKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..272] deduced N/A No confident structure predictions are available.
    2 View Details [273..350] deduced N/A No confident structure predictions are available.
    3 View Details [351..502] deduced N/A No confident structure predictions are available.
    4 View Details [503..695] PSI-BLAST 6.09691 Sec24


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle