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Protein Overview: DXS_ARATH

General Information:
Name(s) found: DXS_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=DXS PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 717 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: chlorophyll biosynthetic process [IMP]
    isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway [TAS]
    Molecular Function: 1-deoxy-D-xylulose-5-phosphate synthase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSAFAFPS YIITKGGLST DSCKSTSLSS SRSLVTDLPS PCLKPNNNSH SNRRAKVCAS  60
   61 LAEKGEYYSN RPPTPLLDTI NYPIHMKNLS VKELKQLSDE LRSDVIFNVS KTGGHLGSSL 120
  121 GVVELTVALH YIFNTPQDKI LWDVGHQSYP HKILTGRRGK MPTMRQTNGL SGFTKRGESE 180
  181 HDCFGTGHSS TTISAGLGMA VGRDLKGKNN NVVAVIGDGA MTAGQAYEAM NNAGYLDSDM 240
  241 IVILNDNKQV SLPTATLDGP SPPVGALSSA LSRLQSNPAL RELREVAKGM TKQIGGPMHQ 300
  301 LAAKVDEYAR GMISGTGSSL FEELGLYYIG PVDGHNIDDL VAILKEVKST RTTGPVLIHV 360
  361 VTEKGRGYPY AERADDKYHG VVKFDPATGR QFKTTNKTQS YTTYFAEALV AEAEVDKDVV 420
  421 AIHAAMGGGT GLNLFQRRFP TRCFDVGIAE QHAVTFAAGL ACEGLKPFCA IYSSFMQRAY 480
  481 DQVVHDVDLQ KLPVRFAMDR AGLVGADGPT HCGAFDVTFM ACLPNMIVMA PSDEADLFNM 540
  541 VATAVAIDDR PSCFRYPRGN GIGVALPPGN KGVPIEIGKG RILKEGERVA LLGYGSAVQS 600
  601 CLGAAVMLEE RGLNVTVADA RFCKPLDRAL IRSLAKSHEV LITVEEGSIG GFGSHVVQFL 660
  661 ALDGLLDGKL KWRPMVLPDR YIDHGAPADQ LAEAGLMPSH IAATALNLIG APREALF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] PSI-BLAST 38.0 2-oxoisovalerate dehydrogenase (E1B), PP module
    2 View Details [73..717] PSI-BLAST 126.0 No description for 2o1sA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle