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Protein Overview: DIOXL_ARATH

General Information:
Name(s) found: DIOXL_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42558925|sp|Q949R4.1|DIOXL_ARATH RecName: Full=4,5-DOPA dioxygenase extradiol-like protein [NCBI NR]
  • gi|26452573|dbj|BAC43371.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|21436089|gb|AAM51245.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18414376|ref|NP_567456.1| catalytic LigB subunit of aromatic ring-opening dioxygenase family [Arabidopsis thaliana] [NCBI NR]
  • gi|15293029|gb|AAK93625.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • Extradiol ring-cleavage dioxygenase OS=Arabidopsis thaliana GN=LIGB PE=2 SV=1 [Swiss-Prot]
  • (Q949R4) 4,5-DOPA dioxygenase extradiol-like protein [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|15293029|gb|AAK93625.1| unknown protein [Arabidopsis thaliana]gi|26452573|dbj|BAC43371.1| unknown protein [Arabidopsis thaliana]gi|42558925|sp|Q949R4|DIOL_ARATH 4,5-DOPA dioxygenase extradiol-like proteingi|184 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 4,5-DOPA dioxygenase extradiol-like protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | catalytic LigB subunit of aromatic ring-opening dioxygenase family | chr4:8618451-8619469 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ferrous iron binding / oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • 4,5-DOPA dioxygenase extradiol-like protein [nr-271106-contam.fasta]
  • | Symbols: | catalytic LigB subunit of aromatic ring-opening dioxygenase family | chr4:8618454-8619472 FORWARD LENGTH=269 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • 4,5-DOPA dioxygenase extradiol-like protein OS=Arabidopsis thaliana GN=At4g15093 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: cellular aromatic compound metabolic process [IEA][ISS]
    oxidation reduction [IEA]
    Molecular Function: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen [IEA]
    zinc ion binding [IEA]
    oxidoreductase activity [IEA][ISS]
    ferrous iron binding [IEA]
    electron carrier activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVNQTFFL SHGSPTLSID DSLEARQFFK SWTQKVLPQK PKSILVISAH WDTKFPSVNT  60
   61 VLRNNTIHDF SGFPDPMYKL KYEAPGAIEL GKRVKELLMK EGGMKRVDED TKRGLDHGAW 120
  121 VPLMLMYPEA DIPICQLSVQ SNQNGSYHYN MGKALASLKD EGVLIIGSGS ATHNLRKLDF 180
  181 NITDGSPVPW ALEFDHWLRD SLLQGRYGDV NEWEEKAPNA KMAHPWPEHL YPLHVVMGAA 240
  241 GGDAKAEQIH TSWQLGTLSY SSYSFTSSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 69.69897 No description for 2pw6A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  1.48772648834229 bayes_pls_golite062009
  • dioxygenase activity
    		•  0.778026315854975 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
    		•  0.676429180336887 bayes_pls_golite062009
  • catalytic activity
    		•  0.639120026974844 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle