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Protein Overview: DCAM2_ARATH

General Information:
Name(s) found: DCAM2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9755641|emb|CAC01794.1| S-adenosylmethionine decarboxylase (adoMetDC2) [Arabidopsis thaliana] [NCBI NR]
  • gi|79327907|ref|NP_001031888.1| adenosylmethionine decarboxylase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|6682287|emb|CAB64672.1| S-adenosylmethionine decarboxylase [Arabidopsis thaliana] [NCBI NR]
  • gi|6624621|emb|CAB63805.1| S-adenosylmethionine decarboxylase [Arabidopsis thaliana] [NCBI NR]
  • gi|17978851|gb|AAL47397.1| AT5g15950/F1N13_90 [Arabidopsis thaliana] [NCBI NR]
  • gi|16930683|gb|AAL32007.1|AF436825_1 AT5g15950/F1N13_90 [Arabidopsis thaliana] [NCBI NR]
  • gi|15237226|ref|NP_197099.1| adenosylmethionine decarboxylase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15213967|sp|Q9S7T9.1|DCAM2_ARATH RecName: Full=S-adenosylmethionine decarboxylase proenzyme 2; Short=AdoMetDC 2; Short=SAMDC 2; Contains: RecName: Full=S-adenosylmethionine decarboxylase 2 alpha chain; Contains: RecName: Full=S-adenosylmethionine decar [NCBI NR]
  • pir||T51378 adenosylmethionine decarboxylase (EC 4.1.1.50) [similarity] - Arabidopsis thaliana [NCBI NR]
  • S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1 [Swiss-Prot]
  • (Q9S7T9) S-adenosylmethionine decarboxylase proenzyme 2 (EC 4.1.1.50) (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] [Swiss-Prot]
  • S-adenosylmethionine decarboxylase [Arabidopsis thaliana]gi|6624621|emb|CAB63805.1| S-adenosylmethionine decarboxylase [Arabidopsis thaliana]gi|9755641|emb|CAC01794.1| S-adenosylmethionine decarboxylase (adoMetDC2) [Arabidopsis thaliana]gi|17978851|gb| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 S-adenosylmethionine decarboxylase proenzyme 2 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | adenosylmethionine decarboxylase family protein | chr5:5206709-5207797 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • adenosylmethionine decarboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • S-adenosylmethionine decarboxylase (adoMetDC2) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • S-adenosylmethionine decarboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g15950/F1N13_90 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • S-adenosylmethionine decarboxylase proenzyme 2 (AdoMetDC 2) (SamDC 2) [Contains: S-adenosylmethionine decarboxylase 2 alpha chain; S-adenosylmethionine decarboxylase 2 beta chain] [nr-271106-contam.fasta]
  • | Symbols: | Adenosylmethionine decarboxylase family protein | chr5:5206706-5207794 FORWARD LENGTH=362 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 362 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: spermidine biosynthetic process [IEA]
    spermine biosynthetic process [IEA]
    Molecular Function: adenosylmethionine decarboxylase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMSAIGFEG YEKRLEVTFF EPGLFLDTQG KGLRALAKSQ IDEILQPAEC TIVSSLSNDQ  60
   61 LDSYVLSESS LFIFPYKIVI KTCGTTKLLL SIEPLLRLAG ELSLDVKAVR YTRGSFLCPG 120
  121 GQPFPHRNFS EEVSVLDGHF AKLGLSSVAY LMGNDDETKK WHVYSASSAN SNNKNNVYTL 180
  181 EMCMTGLDKD KASVFYKNES SSAGSMTDNS GIRKILPQSQ ICDFEFEPCG YSMNSIEGDA 240
  241 ISTIHVTPED GFSYASFEAV GYDFTTMDLS HLVSKVLTCF KPKQFSVAVH STVAQKSYDS 300
  301 GLSVDLDDYG CKESTMESLG EERGTVMYQR FEKLGRYCGS PRSTLKCEWS SNSSCNSEDE 360
  361 KE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] PSI-BLAST 22.09691 S-adenosylmethionine decarboxylase
    2 View Details [69..362] PSI-BLAST 114.0 Crystal structure of S-adenosylmethionine decarboxylase from potato

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • adenosylmethionine decarboxylase activity
    		•  6.97190143843809 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  2.68228786608236 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.55250570844159 bayes_pls_golite062009
  • catalytic activity
    		•  1.25843830926101 bayes_pls_golite062009
  • lyase activity
    		•  0.834955527171148 bayes_pls_golite062009
  • protein binding
    		•  0.189517592830504 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle