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Protein Overview: CNX1_ARATH

General Information:
Name(s) found: CNX1_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Molybdopterin biosynthesis protein CNX1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 670 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: Mo-molybdopterin cofactor biosynthetic process [IDA][IMP]
    auxin mediated signaling pathway [IMP]
    Molecular Function: molybdenum ion binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGQGCCGGG GGKTEMIPTE EALRIVFGVS KRLPPVIVSL YEALGKVLAE DIRAPDPLPP  60
   61 YPASVKDGYA VVASDGPGEY PVITESRAGN DGLGVTVTPG TVAYVTTGGP IPDGADAVVQ 120
  121 VEDTKVIGDV STESKRVKIL IQTKKGTDIR RVGCDIEKDA TVLTTGERIG ASEIGLLATA 180
  181 GVTMVKVYPM PIVAILSTGD ELVEPTAGTL GRGQIRDSNR AMLVAAVMQQ QCKVVDLGIV 240
  241 RDDRKELEKV LDEAVSSGVD IILTSGGVSM GDRDFVKPLL EEKGKVYFSK VLMKPGKPLT 300
  301 FAEIRAKPTE SMLGKTVLAF GLPGNPVSCL VCFNIFVVPT IRQLAGWTSP HPLRVRLRLQ 360
  361 EPIKSDPIRP EFHRAIIKWK DNDGSGTPGF VAESTGHQMS SRLLSMRSAN ALLELPATGN 420
  421 VLSAGSSVSA IIVSDISAFS IDKKASLSEP GSIRKEKKYD EVPGPEYKVA ILTVSDTVSA 480
  481 GAGPDRSGPR AVSVVDSSSE KLGGAKVVAT AVVPDEVERI KDILQKWSDV DEMDLILTLG 540
  541 GTGFTPRDVT PEATKKVIER ETPGLLFVMM QESLKITPFA MLSRSAAGIR GSTLIINMPG 600
  601 NPNAVAECME ALLPALKHAL KQIKGDKREK HPKHIPHAEA TLPTDTWDQS YKSAYETGEK 660
  661 KEEAGCSCTH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..447] PSI-BLAST 109.0 Structural basis of dynamic glycine receptor clustering
    2 View Details [448..670] PSI-BLAST 34.69897 Plant CNX1 G domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.15974340242656 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.55991563183069 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle