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Protein Overview: CNGC5_ARATH

General Information:
Name(s) found: CNGC5_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 717 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: ion transport [IEA]
    Molecular Function: calmodulin binding [TAS]
    cyclic nucleotide binding [ISS]
    potassium channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKRENFVR VDDLDSRLPS SSVAFQQNYA SNFSGQLHPI HASNETSRSF KKGIQKGSKG  60
   61 LKSIGRSLGF GVYRAVFPED LKVSEKKIFD PQDKFLLYCN KLFVASCILS VFVDPFFFYL 120
  121 PVINAESKCL GIDRKLAITA STLRTFIDVF YLAHMALQLR TAYIAPSSRV FGRGELVIDP 180
  181 AQIAKRYLQR WFIIDFLSVL PLPQIVVWRF LQSSNGSDVL ATKQALLFIV LVQYIPRFLR 240
  241 VLPLTSELKR TAGVFAETAW AGAAYYLLLY MLASHIVGAF WYLLALERND ACWQEACIDA 300
  301 GNCSTDFLYC GNQNMDGYAV WNRAKESVLK SKCRADLDDN NPPFDFGIYT QALSSGIVSS 360
  361 QNFIVKYCYC LWWGLQNLST LGQGLETSTY PMEIIFSISL AISGLILFAL LIGNMQTYLQ 420
  421 SLTIRLEEMR VKRRDSEQWM HHRMLPQDLR ERVRRYDQYK WLETRGVDEE YLVQNLPKDL 480
  481 RRDIKRHLCL ALVRRVPLFK SMDDKLLDAI CMRLKPCLFT ESTYLVREGD PVDEMLFIIR 540
  541 GRLESVTTDG GRSGFFNRSL LKEGEFCGEE LLTWALDPKS GVNLPSSTRT VKALTEVEAF 600
  601 ALTSEELKFV ASQFRRLHSR QVQHTFRFYS HQWRTWAACF IQAAWRRYCK RKKMEEAEAE 660
  661 AAAVSSSTAG PSYSIGAAFL ATKFAANALR TIHRNRNTKI RDLVKLQKPP EPDFTAD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..214] FFAS03 1.41 Crystal structure of KvAP-33H1 Fv complex
    3 View Details [215..444] PSI-BLAST 7.69897 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    4 View Details [445..500] FFAS03 2.07 No description for 2ptmA was found.
    5 View Details [501..629] PSI-BLAST 17.0 Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel
    6 View Details [630..717] PSI-BLAST 27.0 Catabolite gene activator protein (CAP), C-terminal domain; Catabolite gene activator protein, N-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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