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Protein Overview: CHMO_ARATH

General Information:
Name(s) found: CHMO_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Choline monooxygenase, chloroplastic OS=Arabidopsis thaliana GN=At4g29890 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 422 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: cellular aromatic compound metabolic process [IEA]
    oxidation reduction [IEA]
    Molecular Function: oxidoreductase activity [IEA]
    iron ion binding [IEA]
    electron carrier activity [IEA][ISS]
    2 iron, 2 sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMTTLTATVP EFLPPSLKST RGYFNSHSEF GVSISKFSRR RFHNPTRVFA VSDISKLVTE  60
   61 FDPKIPLERA STPPSSWYTD PQFYSFELDR VFYGGWQAVG YSDQIKESRD FFTGRLGDVD 120
  121 FVVCRDENGK IHAFHNVCSH HASILASGNG RKSCFVCLYH GWTYSLSGSL VKATRMSGIQ 180
  181 NFSLSEMGLK PLRVAVWGPF VLLKVTAATS RKGEVETDEL VASEWLGTSV GRLSQGGVDS 240
  241 PLSYICRREY TIDCNWKVFC DNYLDGGYHV PYAHKGLMSG LDLETYSTTI FEKVSIQECG 300
  301 GGSKVGEDGF DRLGSEALYA FVYPNFMINR YGPWMDTNLV LPLGPRKCKV VFDYFLDPSL 360
  361 KDDEAFIKRS LEESDRVQME DVMLCESVQR GLESQAYDKG RYALVEKPMH HFHCLLHHNL 420
  421 KL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..422] PSI-BLAST 66.39794 Biphenyl dioxygenase (BphA1A2) derived from Rhodococcus sp. strain RHA1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.21668272655872 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle