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Protein Overview: CHIA_ARATH

General Information:
Name(s) found: CHIA_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9758233|dbj|BAB08732.1| acidic endochitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|61656155|gb|AAX49380.1| At5g24090 [Arabidopsis thaliana] [NCBI NR]
  • gi|57291854|gb|AAW49295.1| At5g24090 [Arabidopsis thaliana] [NCBI NR]
  • gi|27735165|sp|P19172.2|CHIA_ARATH RecName: Full=Acidic endochitinase; Flags: Precursor [NCBI NR]
  • gi|2342455|dbj|BAA21871.1| acidic endochitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|2342449|dbj|BAA21868.1| acidic endochitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|2342445|dbj|BAA21866.1| acidic endochitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|2342441|dbj|BAA21864.1| acidic endochitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|2342437|dbj|BAA21862.1| acidic endochitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|2342435|dbj|BAA21861.1| acidic endochitinase [Arabidopsis thaliana] [NCBI NR]
  • gi|15237886|ref|NP_197797.1| acidic endochitinase (CHIB1) [Arabidopsis thaliana] [NCBI NR]
  • Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2 [Swiss-Prot]
  • (P19172) Acidic endochitinase precursor (EC 3.2.1.14) [athaliana3702.FASTAC.txt]
  • acidic endochitinase [Arabidopsis thaliana]gi|15237886|ref|NP_197797.1| acidic endochitinase (CHIB1) [Arabidopsis thaliana]gi|2342455|dbj|BAA21871.1| acidic endochitinase [Arabidopsis thaliana]gi|2342449|dbj|BAA21868.1| acidic endochitinase [Arabidopsi [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Acidic endochitinase precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | acidic endochitinase (CHIB1) | chr5:8143808-8145156 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At5g24090 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • acidic endochitinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Acidic endochitinase precursor [nr-271106-contam.fasta]
  • hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATCHIA, CHIA | chitinase A | chr5:8143805-8145153 REVERSE LENGTH=302 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 302 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: response to cold [IEP]
    response to salt stress [IEP]
    response to wounding [IEP]
    response to light intensity [IEP]
    cellular response to water deprivation [IEP]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNMTLRKHV IYFLFFISCS LSKPSDASRG GIAIYWGQNG NEGNLSATCA TGRYAYVNVA  60
   61 FLVKFGNGQT PELNLAGHCN PAANTCTHFG SQVKDCQSRG IKVMLSLGGG IGNYSIGSRE 120
  121 DAKVIADYLW NNFLGGKSSS RPLGDAVLDG IDFNIELGSP QHWDDLARTL SKFSHRGRKI 180
  181 YLTGAPQCPF PDRLMGSALN TKRFDYVWIQ FYNNPPCSYS SGNTQNLFDS WNKWTTSIAA 240
  241 QKFFLGLPAA PEAAGSGYIP PDVLTSQILP TLKKSRKYGG VMLWSKFWDD KNGYSSSILA 300
  301 SV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302] PSI-BLAST 57.0 CRYSTAL STRUCTURES OF HEVAMINE, A PLANT DEFENCE PROTEIN WITH CHITINASE AND LYSOZYME ACTIVITY, AND ITS COMPLEX WITH AN INHIBITOR

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • chitinase activity
    		•  3.75203266278127 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  3.1190602686215 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  2.98773241907716 bayes_pls_golite062009
  • catalytic activity
    		•  2.22613067995402 bayes_pls_golite062009
  • hydrolase activity
    		•  1.97740088175981 bayes_pls_golite062009
  • glucosidase activity
    		•  0.58717079348538 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.16438321606077 bayes_pls_golite062009
  • amylase activity
    		•  0.0914002140078796 bayes_pls_golite062009
  • alpha-amylase activity
    		•  0.0521244165288097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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