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Protein Overview: CNG17_ARATH

General Information:
Name(s) found: CNG17_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 720 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: potassium ion transport [IEA]
    ion transport [IEA]
    Molecular Function: ion channel activity [ISS]
    calmodulin binding [ISS]
    cyclic nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRKDKLLM FYSEGKESKE AKWAVNDPMS KSYKLSLPSA LRPDNLLPGN RLRYTDASKS  60
   61 KSSKVSWYKT ILDPGSEIVL KWNWVFIVSC MVALFIDPLY FFVPAIGGDK NYPCARTDTS 120
  121 LSILVTFFRT IADLFYLLHI FIKFRTGFIA PNSSTRVFGR GELVMDPKAI AWRYIKSDFI 180
  181 IDLIATLPLP QIVIWFVIST TKSYRFDHNN NAIALIVLLQ YIPRFYLIIP LSSQIVKATG 240
  241 VVTKTAWAGA AYNLLLYMLA SHVLGAAWYI LSVDRYTSCW KSRCNGEAGQ VNCQLYYLDC 300
  301 DSMYDNNQMT WANVTKVFKL CDARNGEFKY GIFGNAITKN VVSSQFFERY FYCLWWGLQQ 360
  361 LSSYGQNLST TMFMGETTFA VLIAIFGLVL FAHLIGNMQT YLQSLTVRLE EWRLKKRDTE 420
  421 EWMRHRQLPE ELRNRVRRYE QYKWLATRGV DEEVLLQSLP TDLRRDIQRH LCLDLVRRVP 480
  481 FFSQMDDQLL DAICERLVSS LCTEGTYLVR EGDLISEMLF IIRGRLESST TNGGRTGFFN 540
  541 SIILRPGDFC GEELLSWALL PKSTLNLPSS TRTVRALVEV EAFALRAEDL KFVANQFRRL 600
  601 HSKKLQHTFR FYSHHWRTWA ACFIQAAWRR YKRRVMENNL TAIESMENEE GEVGEELVVV 660
  661 EEEECVEESP RTKMNLGVMV LASRFAANTR RGVAAQRVKD VELPRFKKPE EPDFSAEHDD 720
  721

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] FFAS03 1.51 Crystal structure of KvAP-33H1 Fv complex
    2 View Details [200..478] PSI-BLAST 20.522879 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    3 View Details [479..612] PSI-BLAST 16.69897 Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel
    4 View Details [613..720] MSA 1.855995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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