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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNG17_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRKDKLLM FYSEGKESKE AKWAVNDPMS KSYKLSLPSA LRPDNLLPGN RLRYTDASKS  60
   61 KSSKVSWYKT ILDPGSEIVL KWNWVFIVSC MVALFIDPLY FFVPAIGGDK NYPCARTDTS 120
  121 LSILVTFFRT IADLFYLLHI FIKFRTGFIA PNSSTRVFGR GELVMDPKAI AWRYIKSDFI 180
  181 IDLIATLPLP QIVIWFVIST TKSYRFDHNN NAIALIVLLQ YIPRFYLIIP LSSQIVKATG 240
  241 VVTKTAWAGA AYNLLLYMLA SHVLGAAWYI LSVDRYTSCW KSRCNGEAGQ VNCQLYYLDC 300
  301 DSMYDNNQMT WANVTKVFKL CDARNGEFKY GIFGNAITKN VVSSQFFERY FYCLWWGLQQ 360
  361 LSSYGQNLST TMFMGETTFA VLIAIFGLVL FAHLIGNMQT YLQSLTVRLE EWRLKKRDTE 420
  421 EWMRHRQLPE ELRNRVRRYE QYKWLATRGV DEEVLLQSLP TDLRRDIQRH LCLDLVRRVP 480
  481 FFSQMDDQLL DAICERLVSS LCTEGTYLVR EGDLISEMLF IIRGRLESST TNGGRTGFFN 540
  541 SIILRPGDFC GEELLSWALL PKSTLNLPSS TRTVRALVEV EAFALRAEDL KFVANQFRRL 600
  601 HSKKLQHTFR FYSHHWRTWA ACFIQAAWRR YKRRVMENNL TAIESMENEE GEVGEELVVV 660
  661 EEEECVEESP RTKMNLGVMV LASRFAANTR RGVAAQRVKD VELPRFKKPE EPDFSAEHDD 720
  721 

YRC Informatics Platform - Version 3.0
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