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Protein Overview: CNG16_ARATH

General Information:
Name(s) found: CNG16_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 705 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: ion transport [IEA]
    Molecular Function: ion channel activity [ISS]
    calmodulin binding [ISS]
    cyclic nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLHLYTSA RFRNFPTTFS LRHHHNDPNN QRRRSIFSKL RDKTLDPGGD LITRWNHIFL  60
   61 ITCLLALFLD PLYFYLPIVQ AGTACMSIDV RFGIFVTCFR NLADLSFLIH ILLKFKTAFV 120
  121 SKSSRVFGRG ELVMDRREIA IRYLKSEFVI DLAATLPLPQ IMIWFVIPNA GEFRYAAHQN 180
  181 HTLSLIVLIQ YVPRFLVMLP LNRRIIKATG VAAKTAWSGA AYNLILYLLV SHVLGSVWYV 240
  241 LSIQRQHECW RRECIKEMNA THSPSCSLLF LDCGSLHDPG RQAWMRITRV LSNCDARNDD 300
  301 DQHFQFGMFG DAFTNDVTSS PFFDKYFYCL WWGLRNLSSY GQSLAASTLS SETIFSCFIC 360
  361 VAGLVFFSHL IGNVQNYLQS TTARLDEWRV RRRDTEEWMR HRQLPDELQE RVRRFVQYKW 420
  421 LTTRGVDEEA ILRALPLDLR RQIQRHLCLA LVRRVPFFAQ MDDQLLDAIC ERLVPSLNTK 480
  481 DTYVIREGDP VNEMLFIIRG QMESSTTDGG RSGFFNSITL RPGDFCGEEL LTWALVPNIN 540
  541 HNLPLSTRTV RTLSEVEAFA LRAEDLKFVA NQFRRLHSKK LQHAFRYYSH QWRAWGTCFI 600
  601 QAAWRRYMKR KLAMELARQE EEDDYFYDDD GDYQFEEDMP ESNNNNGDEN SSNNQNLSAT 660
  661 ILASKFAANT KRGVLGNQRG STRIDPDHPT LKMPKMFKPE DPGFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] FFAS03 0.95 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    2 View Details [169..441] PSI-BLAST 16.69897 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    3 View Details [442..599] PSI-BLAST 16.522879 Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel
    4 View Details [600..705] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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