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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNG16_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLHLYTSA RFRNFPTTFS LRHHHNDPNN QRRRSIFSKL RDKTLDPGGD LITRWNHIFL  60
   61 ITCLLALFLD PLYFYLPIVQ AGTACMSIDV RFGIFVTCFR NLADLSFLIH ILLKFKTAFV 120
  121 SKSSRVFGRG ELVMDRREIA IRYLKSEFVI DLAATLPLPQ IMIWFVIPNA GEFRYAAHQN 180
  181 HTLSLIVLIQ YVPRFLVMLP LNRRIIKATG VAAKTAWSGA AYNLILYLLV SHVLGSVWYV 240
  241 LSIQRQHECW RRECIKEMNA THSPSCSLLF LDCGSLHDPG RQAWMRITRV LSNCDARNDD 300
  301 DQHFQFGMFG DAFTNDVTSS PFFDKYFYCL WWGLRNLSSY GQSLAASTLS SETIFSCFIC 360
  361 VAGLVFFSHL IGNVQNYLQS TTARLDEWRV RRRDTEEWMR HRQLPDELQE RVRRFVQYKW 420
  421 LTTRGVDEEA ILRALPLDLR RQIQRHLCLA LVRRVPFFAQ MDDQLLDAIC ERLVPSLNTK 480
  481 DTYVIREGDP VNEMLFIIRG QMESSTTDGG RSGFFNSITL RPGDFCGEEL LTWALVPNIN 540
  541 HNLPLSTRTV RTLSEVEAFA LRAEDLKFVA NQFRRLHSKK LQHAFRYYSH QWRAWGTCFI 600
  601 QAAWRRYMKR KLAMELARQE EEDDYFYDDD GDYQFEEDMP ESNNNNGDEN SSNNQNLSAT 660
  661 ILASKFAANT KRGVLGNQRG STRIDPDHPT LKMPKMFKPE DPGFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle