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Protein Overview: CBL10_ARATH

General Information:
Name(s) found: CBL10_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|34222649|sp|Q9LJU0.1|CBL10_ARATH RecName: Full=COBRA-like protein 10; Flags: Precursor [NCBI NR]
  • gi|30685851|ref|NP_188694.2| COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR) [Arabidopsis thaliana] [NCBI NR]
  • gi|29029016|gb|AAO64887.1| At3g20580 [Arabidopsis thaliana] [NCBI NR]
  • gi|26452233|dbj|BAC43204.1| GPI-anchored protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994145|dbj|BAB01166.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • (Q9LJU0) COBRA-like protein 10 precursor [Swiss-Prot]
  • COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1 [Swiss-Prot]
  • unnamed protein product [Arabidopsis thaliana]gi|26452233|dbj|BAC43204.1| GPI-anchored protein [Arabidopsis thaliana]gi|29029016|gb|AAO64887.1| At3g20580 [Arabidopsis thaliana]gi|30685851|ref|NP_188694.2| phytochelatin synthetase-related [Arabidopsis t [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 COBRA-like protein 10 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: COBL10 | COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR) | chr3:7188069-7190422 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GPI-anchored protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • COBRA-like protein 10 precursor [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At3g20580 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: COBL10 | COBRA-like protein 10 precursor | chr3:7188063-7190416 REVERSE LENGTH=672 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 672 amino acids

    Gene Ontology:
    Cellular Component: anchored to membrane [TAS]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG  60
   61 IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE LKGWQMFIGF RHKELIVSAT 120
  121 GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM 180
  181 PRTIKLTNDG WECPAAKRKG GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS 240
  241 FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY 300
  301 KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV 360
  361 FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ FPDPSGLLAV TYAISSWQVV 420
  421 CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP 480
  481 FDNRTLKAKA WAKQNHMPVP KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE 540
  541 DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP 600
  601 GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV 660
  661 FATIAAFALM MD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] deduced N/A No confident structure predictions are available.
    2 View Details [226..426] Pfam 136.69897 No description for PF04833.6 was found. No confident structure predictions are available.
    3 View Details [427..520] deduced N/A No confident structure predictions are available.
    4 View Details [521..672] MSA 2.020959 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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