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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CBL10_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.39
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAIDVKTGM KIPWDVRYSL SLFIFLSSIL FLSNGQDYGM PGEDGGGGAE PPPEMAHCNG  60
   61 IFMSYNFGSR EREYPHVKNV TAQSWAFKST AMIVNAGREE LKGWQMFIGF RHKELIVSAT 120
  121 GATPMDGDYP LDASNGTTFV GSPNMDLKTS IETAGDFTQI SANIEITGTL FGVSKAVTPM 180
  181 PRTIKLTNDG WECPAAKRKG GSMHVCCKRN PKIKNKIGLK TKFAPRRYGD LNIVYDVLQS 240
  241 FDSNYLAQVT IDNDNPLGRL DRWNLTFEWM RGEFINTMRG AYTHKKDPSE CLYSKAGQYY 300
  301 KDLDFSQVMN CQRKPAISDL PPEKKEDNMT GKLPFCCKNG TLLPPIMDPS KSRSMFQLQV 360
  361 FKLPPDLNRT ALYPPQHWKI DGVLNPQYKC GPPVRVDPSQ FPDPSGLLAV TYAISSWQVV 420
  421 CNITKPKAQA SRCCVSFSAF YNNSAVPCNT CACGCNDIDT DTCNANSNPL LLPPDALLVP 480
  481 FDNRTLKAKA WAKQNHMPVP KKLPCPDNCG VSINWHVSTD YKNGWTARLT VFNWRDFAFE 540
  541 DWFVAIDMGK AGPGYENVYS FNGTRVPPSN RTVIFQGLPG MNYLVGQVNG TNPLRDPPVP 600
  601 GKQQSVISFT KKNIKGLNIP EGDGFPTKLF FNGEECALPK HFPKKSSGHR RGISVSMSFV 660
  661 FATIAAFALM MD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle