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Protein Overview: CB5_ARATH

General Information:
Name(s) found: CB5_ARATH [Swiss-Prot]
Description(s) found:
Found 24 descriptions.
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  • Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    PSII associated light-harvesting complex II [IDA]
    photosystem II antenna complex [IMP]
    membrane [IDA]
    chloroplast stromal thylakoid [IDA]
    light-harvesting complex [ISS]
    plastoglobule [IDA]
    chloroplast thylakoid membrane [IDA]
    thylakoid [IDA]
    Biological Process: nonphotochemical quenching [IMP]
    response to far red light [IEP]
    photosynthesis [IMP][ISS]
    response to blue light [IEP]
    response to red light [IEP]
    Molecular Function: chlorophyll binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLGVSEML GTPLNFRAVS RSSAPLASSP STFKTVALFS KKKPAPAKSK AVSETSDELA  60
   61 KWYGPDRRIF LPDGLLDRSE IPEYLNGEVA GDYGYDPFGL GKKPENFAKY QAFELIHARW 120
  121 AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV 180
  181 LLGGAEYYRI TNGLDFEDKL HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF 240
  241 IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..280] PSI-BLAST 76.0 Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle