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Protein Overview: CAP2_ARATH

General Information:
Name(s) found: CAP2_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Putative clathrin assembly protein At2g25430 OS=Arabidopsis thaliana GN=At2g25430 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 653 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    plasma membrane [IDA]
    Biological Process: clathrin coat assembly [IEA]
    Molecular Function: clathrin binding [IEA]
    phospholipid binding [IEA]
    binding [ISS]
    phosphatidylinositol binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY IREILNLTSL  60
   61 SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD PIFQEEILYS TRRGTRMLNM 120
  121 SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR 180
  181 GRDDFRSPPP RSYDYENGGG GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK 240
  241 KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD 300
  301 ICEVLAVLLD KFFDMEYSDC VKAFDAYASA AKQIDELIAF YNWCKETGVA RSSEYPEVQR 360
  361 ITSKLLETLE EFVRDRAKRG KSPERKEIEA PPPVVEEEEP EPDMNEIKAL PPPENYTPPP 420
  421 PPEPEPQPEK PQFTEDLVNL REDEVTADDQ GNKFALALFA GPPGNNGKWE AFSSNGVTSA 480
  481 WQNPAAEPGK ADWELALVET TSNLEKQTAA LGGGFDNLLL NGMYDQGMVR QHVSTSQLTG 540
  541 GSASSVALPL PGKTNNQVLA LPAPDGTVEK VNQDPFAASL TIPPPSYVQM AEMEKKQYLL 600
  601 SQEQQLWQQY QRDGMRGQAS LAKMNTGPVP AYGMPPVNGM GPPPTGYYYN NPY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..315] PSI-BLAST 89.0 Clathrin assembly lymphoid myeloid leukaemia protein, Calm
    2 View Details [316..373] FFAS03 2.45 Clathrin assembly lymphoid myeloid leukaemia protein, Calm
    3 View Details [374..479] deduced N/A No confident structure predictions are available.
    4 View Details [480..653] PSI-BLAST 5.69897 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle