| Protein: | CAP2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 653 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
587.0 | [0..1] | [653..1] |
|
Region A: Residues: [1-315] |
1 11 21 31 41 51
| | | | | |
1 MAPSIRKAIG AVKDQTSIGI AKVASNMAPD LEVAIVKATS HDDDPASEKY IREILNLTSL 60
61 SRGYILACVT SVSRRLSKTR DWVVALKALM LVHRLLNEGD PIFQEEILYS TRRGTRMLNM 120
121 SDFRDEAHSS SWDHSAFVRT YAGYLDQRLE LALFERKSGV SVNSGGNSSH HSNNDDRYGR 180
181 GRDDFRSPPP RSYDYENGGG GGSDFRGDNN GYGGVPKRSR SYGDMTEMGG GGGGGGRDEK 240
241 KVVTPLREMT PERIFGKMGH LQRLLDRFLS LRPTGLAKNS RMILIALYPV VRESFKLYAD 300
301 ICEVLAVLLD KFFDM
|
| Detection Method: |  |
| Confidence: | 89.0 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [316-373] |
1 11 21 31 41 51
| | | | | |
1 EYSDCVKAFD AYASAAKQID ELIAFYNWCK ETGVARSSEY PEVQRITSKL LETLEEFV
|
| Detection Method: | |
| Confidence: | 2.45 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [374-479] |
1 11 21 31 41 51
| | | | | |
1 RDRAKRGKSP ERKEIEAPPP VVEEEEPEPD MNEIKALPPP ENYTPPPPPE PEPQPEKPQF 60
61 TEDLVNLRED EVTADDQGNK FALALFAGPP GNNGKWEAFS SNGVTS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [480-653] |
1 11 21 31 41 51
| | | | | |
1 AWQNPAAEPG KADWELALVE TTSNLEKQTA ALGGGFDNLL LNGMYDQGMV RQHVSTSQLT 60
61 GGSASSVALP LPGKTNNQVL ALPAPDGTVE KVNQDPFAAS LTIPPPSYVQ MAEMEKKQYL 120
121 LSQEQQLWQQ YQRDGMRGQA SLAKMNTGPV PAYGMPPVNG MGPPPTGYYY NNPY
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
