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Protein Overview: CAP10_ARATH

General Information:
Name(s) found: CAP10_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8978352|dbj|BAA98205.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|46395999|sp|Q9LHS0.1|CAP10_ARATH RecName: Full=Putative clathrin assembly protein At5g35200 [NCBI NR]
  • gi|23198334|gb|AAN15694.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|19698875|gb|AAL91173.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15238435|ref|NP_198370.1| epsin N-terminal homology (ENTH) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana GN=At5g35200 PE=1 SV=1 [Swiss-Prot]
  • (Q9LHS0) Putative clathrin assembly protein At5g35200 [Swiss-Prot]
  • unknown protein [Arabidopsis thaliana]gi|8978352|dbj|BAA98205.1| unnamed protein product [Arabidopsis thaliana]gi|19698875|gb|AAL91173.1| unknown protein [Arabidopsis thaliana]gi|46395999|sp|Q9LHS0|CA10_ARATH Putative clathrin assembly protein At5g3520 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative clathrin assembly protein At5g35200 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | epsin N-terminal homology (ENTH) domain-containing protein | chr5:13479693-13482811 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative clathrin assembly protein At5g35200 [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ENTH/ANTH/VHS superfamily protein | chr5:13462463-13465581 REVERSE LENGTH=544 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 544 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: clathrin coat assembly [IEA]
    Molecular Function: clathrin binding [IEA]
    binding [ISS]
    phospholipid binding [IEA]
    phosphatidylinositol binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGGGGSQSS LRRYLGAIKD TTTVSLAKVN SDYKELDIAI VKATNHVERP SKERYIRAIF  60
   61 MAISATRPRA DVAYCIHALA RRLSRTHNWA VALKTLIVIH RALREVDQTF HEEVINYSRS 120
  121 RSHMLNMSHF KDDSGPNAWA YSAWVRFYAL FLEERLECFR VLKYDVEVDP PRTKDLDTPD 180
  181 LLEQLPALQE LLFRVLDCQP EGAAVQNHII QLALSMVISE STKIYQALTD GIDNLVDKFF 240
  241 DMQRNDAVKA LDMYRRAVKQ AGRLSEFFEV CKSVNVGRGE RFIKIEQPPT SFLQAMEEYV 300
  301 KEAPLAAGVK KEQVVEKLTA PKEILAIEYE IPPKVVEEKP ASPEPVKAEA EKPVEKQPDL 360
  361 LSMDDPAPMV SELEEKNALA LAIVPVSVEQ PHSTTDFTNG NSTGWELALV TAPSSNEGAA 420
  421 ADSKLAGGLD KLTLDSLYED AIRVSQQQNR SYNPWEQNPV HNGHMMHQPF YASNGVAAPQ 480
  481 PFQMANQNHQ TFGYQHQNAG MMMGPVQQPY QQQQQNMNNP FGNPFVSNGN PQQPQGYNPY 540
  541 PRYM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..305] PSI-BLAST 89.69897 Clathrin assembly lymphoid myeloid leukaemia protein, Calm
    2 View Details [306..376] deduced N/A No confident structure predictions are available.
    3 View Details [377..544] PSI-BLAST 7.522879 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle