| Protein: | CAP10_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 544 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP10_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
410.0 | [0..5] | [538..1] |
|
Region A: Residues: [1-305] |
1 11 21 31 41 51
| | | | | |
1 MSGGGGSQSS LRRYLGAIKD TTTVSLAKVN SDYKELDIAI VKATNHVERP SKERYIRAIF 60
61 MAISATRPRA DVAYCIHALA RRLSRTHNWA VALKTLIVIH RALREVDQTF HEEVINYSRS 120
121 RSHMLNMSHF KDDSGPNAWA YSAWVRFYAL FLEERLECFR VLKYDVEVDP PRTKDLDTPD 180
181 LLEQLPALQE LLFRVLDCQP EGAAVQNHII QLALSMVISE STKIYQALTD GIDNLVDKFF 240
241 DMQRNDAVKA LDMYRRAVKQ AGRLSEFFEV CKSVNVGRGE RFIKIEQPPT SFLQAMEEYV 300
301 KEAPL
|
| Detection Method: |  |
| Confidence: | 89.69897 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [306-376] |
1 11 21 31 41 51
| | | | | |
1 AAGVKKEQVV EKLTAPKEIL AIEYEIPPKV VEEKPASPEP VKAEAEKPVE KQPDLLSMDD 60
61 PAPMVSELEE K
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [377-544] |
1 11 21 31 41 51
| | | | | |
1 NALALAIVPV SVEQPHSTTD FTNGNSTGWE LALVTAPSSN EGAAADSKLA GGLDKLTLDS 60
61 LYEDAIRVSQ QQNRSYNPWE QNPVHNGHMM HQPFYASNGV AAPQPFQMAN QNHQTFGYQH 120
121 QNAGMMMGPV QQPYQQQQQN MNNPFGNPFV SNGNPQQPQG YNPYPRYM
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
