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Protein Overview: CK5P1_ARATH

General Information:
Name(s) found: CK5P1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • CDK5RAP1-like protein OS=Arabidopsis thaliana GN=At4g36390 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 640 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: catalytic activity [IEA]
    iron-sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLSSLS SILSNPHGCS LCFKASTQRC FALRFLSSKA THASSSSSSA LLPRCRSSTH  60
   61 RLTQKPINRK KGFSLNLSRS FSISQIASSG KFDGPSLHQF VSNAQAHASL TTPETESEST 120
  121 LDSDIASKGR IYHETYGCQM NINDMEIVLA IMKNSGYKEV VTDPESAEVI FVNTCAIREN 180
  181 AEQRVWQRLN YFWFLKREWK VNAATGRAKS LKPPKVVVLG CMAERLKDKI LDSDKMVDVV 240
  241 CGPDAYRDLP RLLEEVDYGQ KGINTLLSLE ETYADISPVR ISENSITAFV SVMRGCNNMC 300
  301 AFCIVPFTRG RERSRPVESI IREVGELWES GVKEVTLLGQ NVNSYNDDSA DRESGANWEY 360
  361 SEGFSSRCKV KNMGLRFADL LDRLSVEFPE MRFRFTSPHP KDYPDELLYL MRDRHNICNL 420
  421 IHLPAQSGNS RILEQMRRGY TREAYLDLVK KIRSIIPDVA ITSDFITGFC GETEEEHQET 480
  481 LSLVRAVGYD MAYMFAYSMR EKTHAHRNYT DDVPEEVKQR RLTELIDAFR ETTGPCYDSQ 540
  541 VGSTQLVLVE GPNKRAPETE LIGKTDKGHR VSFVTKPLFD KACLLDGDDL KRNPGIGDFV 600
  601 EVQIEKSTRA SLFGEALAIS KMSLFHDVGV VDAVVASCAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] deduced N/A No confident structure predictions are available.
    2 View Details [129..283] Pfam 51.49485 No description for PF00919.11 was found. No confident structure predictions are available.
    3 View Details [284..640] PSI-BLAST 68.221849 No description for 2qgqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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