Protein Overview: CD48B_ARATH

General Information:
Name(s) found:	CD48B_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|4406773\|gb\|AAD20084.1\| putative AAA-type ATPase [Arabidopsis thaliana] [NCBI NR] gi\|30725416\|gb\|AAP37730.1\| At2g03670 [Arabidopsis thaliana] [NCBI NR] gi\|28201774\|sp\|Q9ZPR1.1\|CD48B_ARATH RecName: Full=Cell division control protein 48 homolog B; Short=AtCDC48b [NCBI NR] pir\|\|A84451 probable AAA-type ATPase [imported] - Arabidopsis thaliana [NCBI NR] gi\|17064734\|gb\|AAL32521.1\| putative AAA-type ATPase [Arabidopsis thaliana] [NCBI NR] gi\|15227690\|ref\|NP_178463.1\| CDC48B; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding [Arabidopsis thaliana] [NCBI NR] Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1 [Swiss-Prot] (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b) [Swiss-Prot] At2g03670 [Arabidopsis thaliana]gi\|4406773\|gb\|AAD20084.1\| putative AAA-type ATPase [Arabidopsis thaliana]gi\|17064734\|gb\|AAL32521.1\| putative AAA-type ATPase [Arabidopsis thaliana]gi\|28201774\|sp\|Q9ZPR1\|C48B_ARATH Cell division control protein 48 homolog [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Cell division control protein 48 homolog B [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: CDC48B \| CDC48B; ATPase \| chr2:1117592-1120358 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] CDC48B; ATP binding / ATP-dependent peptidase/ ATPase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase [Arabidopsis thaliana] [nr-271106-contam.fasta] putative AAA-type ATPase [Arabidopsis thaliana] [nr-271106-contam.fasta] At2g03670 [Arabidopsis thaliana] [nr-271106-contam.fasta] Cell division control protein 48 homolog B (AtCDC48b) [nr-271106-contam.fasta] \| Symbols: CDC48B \| cell division cycle 48B \| chr2:1117595-1120361 FORWARD LENGTH=603 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	603 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	ATPase activity [ISS] nucleotide binding [IEA] ATP binding [IEA] nucleoside-triphosphatase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL  60
   61 LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES EKVLREAFAE ASSHAVSDKP 120
  121 SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA 180
  181 LRRAGRFDAL VEVSTPNEED RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR 240
  241 EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ 300
  301 AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY 360
  361 VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS SNSSTVGERL LSTLLTEMDG 420
  421 LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV 480
  481 DLRKIAEETD LFTGAELEGL CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE 540
  541 TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA 600
  601 SAT

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..603]	PSI-BLAST	126.0	VCP/p97

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.49

Protein Overview: CD48B_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: