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Protein Overview: CD48B_ARATH

General Information:
Name(s) found: CD48B_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Cell division control protein 48 homolog B OS=Arabidopsis thaliana GN=CDC48B PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 603 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: ATPase activity [ISS]
    nucleotide binding [IEA]
    ATP binding [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL  60
   61 LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES EKVLREAFAE ASSHAVSDKP 120
  121 SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA 180
  181 LRRAGRFDAL VEVSTPNEED RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR 240
  241 EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ 300
  301 AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY 360
  361 VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS SNSSTVGERL LSTLLTEMDG 420
  421 LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV 480
  481 DLRKIAEETD LFTGAELEGL CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE 540
  541 TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA 600
  601 SAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..603] PSI-BLAST 126.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.49

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle