Protein Overview: AMT12_ARATH

General Information:
Name(s) found:	AMT12_ARATH [Swiss-Prot]
Description(s) found: Found 19 descriptions. SHOW ALL	Ammonium transporter 1 member 2 OS=Arabidopsis thaliana GN=AMT1-2 PE=1 SV=1 [Swiss-Prot]
Organism:	Arabidopsis thaliana
Length:	514 amino acids
Gene Ontology:
Cellular Component:	membrane [ISS] plasma membrane [IDA]
Biological Process:	ammonium transport [IMP] transport [ISS] response to nematode [IEP] methylammonium transport [IMP]
Molecular Function:	ammonium transmembrane transporter activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTATTTCSA VDLSALLSSS SNSTSSLAAA TFLCSQISNI SNKLSDTTYA VDNTYLLFSA  60
   61 YLVFAMQLGF AMLCAGSVRA KNTMNIMLTN VLDAAAGAIS YYLFGFAFAF GTPSNGFIGR 120
  121 HHSFFALSSY PERPGSDFSF FLYQWAFAIA AAGITSGSIA ERTQFVAYLI YSTFLTGFVY 180
  181 PTVSHWFWSS DGWASASRSD NNLLFGSGAI DFAGSGVVHM VGGIAGLCGA LVEGPRIGRF 240
  241 DRSGRSVALR GHSASLVVLG TFLLWFGWYG FNPGSFLTIL KGYDKSRPYY GQWSAVGRTA 300
  301 VTTTLSGCTA ALTTLFSKRL LAGHWNVIDV CNGLLGGFAA ITSGCAVVEP WAAIVCGFVA 360
  361 SWVLIGFNLL AKKLKYDDPL EAAQLHGGCG AWGLIFTGLF ARKEYVNEIY SGDRPYGLFM 420
  421 GGGGKLLAAQ IVQIIVIVGW VTVTMGPLFY GLHKMNLLRI SAEDEMAGMD MTRHGGFAYA 480
  481 YNDEDDVSTK PWGHFAGRVE PTSRSSTPTP TLTV

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
ammonium transmembrane transporter activity	10.0624820335928	bayes_pls_golite062009
organic cation transmembrane transporter activity	9.07420898067257	bayes_pls_golite062009
cation transmembrane transporter activity	7.57181833547312	bayes_pls_golite062009
ion transmembrane transporter activity	7.46308808953548	bayes_pls_golite062009
methylammonium transmembrane transporter activity	7.38326654060024	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	7.08971867997216	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	7.03159982829686	bayes_pls_golite062009
transporter activity	5.3870893301235	bayes_pls_golite062009
transmembrane transporter activity	5.3046132351753	bayes_pls_golite062009
substrate-specific transporter activity	5.16067985999244	bayes_pls_golite062009
high affinity secondary active ammonium transmembrane transporter activity	3.56825523857899	bayes_pls_golite062009
amine transmembrane transporter activity	2.81164277777293	bayes_pls_golite062009
active transmembrane transporter activity	1.08017669832334	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..514]	PSI-BLAST	95.0	The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.

Protein Overview: AMT12_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: