YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ARFD_ARATH

General Information:
Name(s) found: ARFD_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana] [NCBI NR]
  • gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4 [NCBI NR]
  • gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana] [NCBI NR]
  • gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana] [NCBI NR]
  • gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana] [NCBI NR]
  • gi|15239335|ref|NP_200853.1| ARF4 (AUXIN RESPONSE FACTOR 4); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana] [NCBI NR]
  • Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=1 SV=1 [Swiss-Prot]
  • (Q9ZTX9) Auxin response factor 4 [athaliana3702.FASTAC.txt]
  • auxin response factor 4 [Arabidopsis thaliana]gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Ar [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Auxin response factor 4 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4); transcription factor | chr5:24325784-24329413 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • auxin response factor ARF4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Auxin response factor 4 [nr-271106-contam.fasta]
  • auxin response factor 4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ARF4 (AUXIN RESPONSE FACTOR 4); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ARF4 | auxin response factor 4 | chr5:24308558-24312187 REVERSE LENGTH=788 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 788 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: vegetative phase change [IGI]
    regulation of transcription, DNA-dependent [ISS]
    abaxial cell fate specification [IGI]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFDLNTEIA EVEEEENDDV GVGVGGGTRI DKGRLGISPS SSSSCSSGSS SSSSSTGSAS  60
   61 SIYSELWHAC AGPLTCLPKK GNVVVYFPQG HLEQDAMVSY SSPLEIPKFD LNPQIVCRVV 120
  121 NVQLLANKDT DEVYTQVTLL PLQEFSMLNG EGKEVKELGG EEERNGSSSV KRTPHMFCKT 180
  181 LTASDTSTHG GFSVPRRAAE DCFAPLDYKQ QRPSQELIAK DLHGVEWKFR HIYRGQPRRH 240
  241 LLTTGWSIFV SQKNLVSGDA VLFLRDEGGE LRLGIRRAAR PRNGLPDSII EKNSCSNILS 300
  301 LVANAVSTKS MFHVFYSPRA THAEFVIPYE KYITSIRSPV CIGTRFRMRF EMDDSPERRC 360
  361 AGVVTGVCDL DPYRWPNSKW RCLLVRWDES FVSDHQERVS PWEIDPSVSL PHLSIQSSPR 420
  421 PKRPWAGLLD TTPPGNPITK RGGFLDFEES VRPSKVLQGQ ENIGSASPSQ GFDVMNRRIL 480
  481 DFAMQSHANP VLVSSRVKDR FGEFVDATGV NPACSGVMDL DRFPRVLQGQ EICSLKSFPQ 540
  541 FAGFSPAAAP NPFAYQANKS SYYPLALHGI RSTHVPYQNP YNAGNQSSGP PSRAINFGEE 600
  601 TRKFDAQNEG GLPNNVTADL PFKIDMMGKQ KGSELNMNAS SGCKLFGFSL PVETPASKPQ 660
  661 SSSKRICTKV HKQGSQVGRA IDLSRLNGYD DLLMELERLF NMEGLLRDPE KGWRILYTDS 720
  721 ENDMMVVGDD PWHDFCNVVW KIHLYTKEEV ENANDDNKSC LEQAALMMEA SKSSSVSQPD 780
  781 SSPTITRV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] MSA 1.08398 View MSA. No confident structure predictions are available.
    2 View Details [141..298] PSI-BLAST 37.69897 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [299..392] MSA 4.118986 View MSA. No confident structure predictions are available.
    4 View Details [393..639] deduced N/A No confident structure predictions are available.
    5 View Details [640..788] FFAS03 0.976 Bud emergence mediator Bemp1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle